RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FAM45AQ8TCE6 357 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 RIT1Q92963 219 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 MAGOHBQ96A72 148 aaKnown RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 MAGED4Q96JG8 741 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 RUNDC3BQ96NL0 473 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 OR4K3Q96R72 315 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 NKX3-1Q99801 234 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 OVOL2Q9BRP0 275 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 CAPS2Q9BXY5 557 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 EHD1Q9H4M9 534 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 NT5DC2Q9H857 520 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 POPDC3Q9HBV1 291 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 MCCC2Q9HCC0 563 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 FBXO6Q9NRD1 293 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 DNAJB9Q9UBS3 223 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 TRMT6Q9UJA5 497 aaKnown RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 KLF13Q9Y2Y9 288 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 YARS2Q9Y2Z4 477 aaKnown RBP3.95□□□□□ -1.78
CSDE1-212ENST00000529046 AKAP9Q99996 3911 aa3.95□□□□□ -1.78
CSDE1-212ENST00000529046 NCOA6Q14686 2063 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CNTRLQ7Z7A1 2325 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ZGRF1Q86YA3 2104 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 IGHV3-20A0A0C4DH32 117 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 MEX3AA1L020 520 aaKnown RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 MPTX1A8MV57 137 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 NPIPA5E9PKD4 350 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 PGRMC1O00264 195 aaKnown RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 DNALI1O14645 258 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ARHGEF9O43307 516 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 OR1F1O43749 312 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 RDH16O75452 317 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 B3GALNT1O75752 331 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 IGHG3P01860 377 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 UQCRHP07919 91 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 YES1P07947 543 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 RNH1P13489 461 aaKnown RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF24P17028 368 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF10P21506 573 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 EDNRAP25101 427 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 TLX1P31314 330 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 PEX19P40855 299 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ARFIP1P53367 373 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CDKN2DP55273 166 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 STXBP1P61764 594 aaKnown RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 REEP5Q00765 189 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 SCN1BQ07699 218 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CUL1Q13616 776 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 TSTA3Q13630 321 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 MEP1BQ16820 701 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 DEFB134Q4QY38 66 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF613Q6PF04 617 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 SHQ1Q6PI26 577 aaKnown RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 SBSNQ6UWP8 590 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 FCRLAQ7L513 359 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 SPATA21Q7Z572 469 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 MYPOPQ86VE0 399 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 HOGA1Q86XE5 327 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CATSPERDQ86XM0 798 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 MORN4Q8NDC4 146 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 AGAP11Q8TF27 550 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CA5BP1Q8WTZ4 195 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 SLC5A11Q8WWX8 675 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 NEIL2Q969S2 332 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 WDR34Q96EX3 536 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CERS2Q96G23 380 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 BTBD9Q96Q07 612 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CITED2Q99967 270 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-212ENST00000529046 AIF1LQ9BQI0 150 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CLEC7AQ9BXN2 247 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ROGDIQ9GZN7 287 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ATG10Q9H0Y0 220 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 UBQLN3Q9H347 655 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 ZDHHC11Q9H8X9 412 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 LZTFL1Q9NQ48 299 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 KCNN3Q9UGI6 736 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 NPIPA1Q9UND3 350 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 OARD1Q9Y530 152 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 POMT1Q9Y6A1 747 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 HEATR5BQ9P2D3 2071 aa3.94□□□□□ -1.78
CSDE1-212ENST00000529046 CSMD1Q96PZ7 3565 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 MDC1Q14676 2089 aaKnown RBP3.93□□□□□ -1.78
CSDE1-212ENST00000529046 DIDO1Q9BTC0 2240 aaKnown RBP3.93□□□□□ -1.78
CSDE1-212ENST00000529046 LRIT2A6NDA9 550 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 USP27XA6NNY8 438 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 NPIPA3F8WFD2 350 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 PSMD12O00232 456 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF195O14628 629 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 BCKDKO14874 412 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 CTNSO60931 367 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 SCELO95171 688 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 F10P00742 488 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 C1GALT1C1LP0DN25 315 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 CD1EP15812 388 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 ABOP16442 354 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 RPL35AP18077 110 aaKnown RBP3.93□□□□□ -1.78
CSDE1-212ENST00000529046 LBPP18428 481 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 CNR1P21554 472 aa3.93□□□□□ -1.78
CSDE1-212ENST00000529046 SERPINB1P30740 379 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms