RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZNF433Q8N7K0 673 aaPredicted RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 SMYD1Q8NB12 490 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 SEMA6DQ8NFY4 1073 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OR8J3Q8NGG0 315 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OR52E4Q8NGH9 312 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 OR4D11Q8NGI4 311 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 MFSD8Q8NHS3 518 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 SLC38A4Q969I6 547 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF583Q96ND8 569 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 ARHGDIGQ99819 225 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 SF3B5Q9BWJ5 86 aaKnown RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 TRIM2Q9C040 744 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 YIPF3Q9GZM5 350 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 PIF1Q9H611 641 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 TESQ9UGI8 421 aaKnown RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 USP22Q9UPT9 525 aa7.42□□□□□ -1.22
SSBP3-212ENST00000528930 NOSIPQ9Y314 301 aaKnown RBP7.42□□□□□ -1.22
SSBP3-212ENST00000528930 A0A087WUJ7 227 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 BBIP1A8MTZ0 92 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 FAM157AC9JC47 383 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 SLC22A2O15244 555 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 LMX1BO60663 402 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 MRPL33O75394 65 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 PLAUP00749 431 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 IGHV3-9P01782 118 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 F13BP05160 661 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 IL32P24001 234 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 RPS5P46782 204 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 RGS8P57771 180 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TMED1Q13445 227 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 KRT72Q14CN4 511 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 MAPRE2Q15555 327 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 MMEL1Q495T6 779 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 ALG10BQ5I7T1 473 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 FAM120AOSQ5T036 256 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TSPO2Q5TGU0 170 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 BHLHA15Q7RTS1 189 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 PATL1Q86TB9 770 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TSPYL5Q86VY4 417 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 RBM45Q8IUH3 476 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 EPHX4Q8IUS5 362 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 SLC30A8Q8IWU4 369 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 POU5F2Q8N7G0 328 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 OR9K2Q8NGE7 335 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 OR6T1Q8NGN1 323 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 RP9Q8TA86 221 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 DNAJA4Q8WW22 397 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 HSD17B8Q92506 261 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 KISS1RQ969F8 398 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TAAR8Q969N4 342 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM45BQ96B21 275 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 APH1AQ96BI3 265 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TAMM41Q96BW9 452 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 KTI12Q96EK9 354 aaPredicted RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 PLPPR2Q96GM1 343 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF385AQ96PM9 386 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 SH3GL1Q99961 368 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM204Q9BSN7 226 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 TAPBPLQ9BX59 468 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 EVA1AQ9H8M9 152 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 SLC7A10Q9NS82 523 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 ADPRHL2Q9NX46 363 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 STX18Q9P2W9 335 aaKnown RBP7.41□□□□□ -1.22
SSBP3-212ENST00000528930 RPS6KB2Q9UBS0 482 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 MALT1Q9UDY8 824 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 SLC9A8Q9Y2E8 581 aa7.41□□□□□ -1.22
SSBP3-212ENST00000528930 SMIM31A0A1B0GVY4 71 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 M0R3H8 397 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 FMO6PO60774 539 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 CCDC22O60826 627 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 VAMP5O95183 116 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 LYPD3O95274 346 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 AHSA1O95433 338 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 THY1P04216 161 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ITGA5P08648 1049 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 PNMTP11086 282 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 COX4I1P13073 169 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF16P17020 682 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ACVR1BP36896 505 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 PTDSS1P48651 473 aaKnown RBP7.4□□□□□ -1.22
SSBP3-212ENST00000528930 CDH12P55289 794 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ACTG1P63261 375 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 SLC34A1Q06495 639 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 FAPQ12884 760 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 LSAMPQ13449 338 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 GABRA6Q16445 453 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 TIMM23BQ5SRD1 257 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 NCMAPQ5T1S8 102 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 FAM69AQ5T7M9 428 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 INTS11Q5TA45 600 aaKnown RBP7.4□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM225Q6GV28 225 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 FDX2Q6P4F2 183 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 C5orf46Q6UWT4 87 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 CASP12Q6UXS9 341 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ZNF704Q6ZNC4 412 aaPredicted RBP7.4□□□□□ -1.22
SSBP3-212ENST00000528930 CREB3L2Q70SY1 520 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 ARHGAP24Q8N264 748 aa7.4□□□□□ -1.22
SSBP3-212ENST00000528930 UBE2J2Q8N2K1 259 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms