RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 FHL1Q13642 323 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 DEFB109BQ30KR1 87 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TRIQKQ629K1 86 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 HBMQ6B0K9 141 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ZNF787Q6DD87 383 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 MZT2BQ6NZ67 158 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 LEG1Q6P5S2 330 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ASB18Q6ZVZ8 466 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TMPRSS9Q7Z410 1059 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 FAM220AQ7Z4H9 259 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 CEACAM19Q7Z692 300 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 C9orf40Q8IXQ3 194 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 PRSS58Q8IYP2 241 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ZNF321PQ8N8H1 164 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 NPEPL1Q8NDH3 523 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 C19orf18Q8NEA5 215 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 OR2T4Q8NH00 348 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ABHD4Q8TB40 342 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 CPT1CQ8TCG5 803 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 STT3BQ8TCJ2 826 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 THAP4Q8WY91 577 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
USF1-208ENST00000528768 NUDT22Q9BRQ3 303 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TTYH2Q9BSA4 534 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 MMP25Q9NPA2 562 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 POLE4Q9NR33 117 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 SLC39A1Q9NY26 324 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 COMMD3Q9UBI1 195 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 RABL2AQ9UBK7 228 aaPredicted RBP10.65□□□□□ -0.7
USF1-208ENST00000528768 RABL2BQ9UNT1 228 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 B3GALT1Q9Y5Z6 326 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TMEM14AQ9Y6G1 99 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 V9GYH0 126 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 OTOGQ6ZRI0 2925 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 IGKV1D-42A0A075B6H8 117 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 A1L4Q6 167 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 FAM25AB3EWG3 89 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 FAM25CB3EWG5 89 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 FAM25GB3EWG6 89 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 ZNF879B4DU55 563 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 AGRPO00253 132 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 PDCD5O14737 125 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 OGG1O15527 345 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 OR2T1O43869 369 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 CPNE3O75131 537 aaKnown RBP10.64□□□□□ -0.71
USF1-208ENST00000528768 ALOX12BO75342 701 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 SCRG1O75711 98 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 IL7P13232 177 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 PYCR1P32322 319 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 AQP2P41181 271 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 ZNF117Q03924 483 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 KRTAP21-3Q3LHN1 58 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 GLYR1Q49A26 553 aaPredicted RBP10.64□□□□□ -0.71
USF1-208ENST00000528768 CDONQ4KMG0 1287 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NKAIN1Q4KMZ8 207 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
USF1-208ENST00000528768 CCBE1Q6UXH8 406 aaPredicted RBP10.64□□□□□ -0.71
USF1-208ENST00000528768 B3GLCTQ6Y288 498 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 SLC16A9Q7RTY1 509 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 GRINAQ7Z429 371 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 PRR22Q8IZ63 422 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 LRRC17Q8N6Y2 441 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 SYT14Q8NB59 555 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 OR6K6Q8NGW6 343 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 OR6S1Q8NH40 331 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NUBPLQ8TB37 319 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 STK35Q8TDR2 534 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 ARSGQ96EG1 525 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 CCDC74BQ96LY2 380 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NMNAT3Q96T66 252 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 ATF6BQ99941 703 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NEURL2Q9BR09 285 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NMNAT2Q9BZQ4 307 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 KLHL1Q9NR64 748 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 SDHAF3Q9NRP4 125 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NPAP1Q9NZP6 1156 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 NPFFR2Q9Y5X5 522 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 KCNMB2Q9Y691 235 aa10.64□□□□□ -0.71
USF1-208ENST00000528768 PRRC2CQ9Y520 2896 aaKnown RBP10.64□□□□□ -0.71
USF1-208ENST00000528768 SETD2Q9BYW2 2564 aaPredicted RBP10.64□□□□□ -0.71
USF1-208ENST00000528768 ESPL1Q14674 2120 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ARPC4-TTLL3A0A0A6YYG9 625 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TRAV1-2A0A0B4J238 106 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TEX13CA0A0J9YWL9 993 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 HSPB2A8KAH6 182 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 A8MVM7 634 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 XKRYO14609 159 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ZNF432O94892 652 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 AHSA1O95433 338 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ONECUT2O95948 504 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 GYPBP06028 91 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ASAH2BP0C7U1 165 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 CLUP10909 449 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 EDNRAP25101 427 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 ABCD3P28288 659 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 EVI2BP34910 448 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TGM4P49221 684 aa10.63□□□□□ -0.71
USF1-208ENST00000528768 TMED10P49755 219 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms