RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 CHP2O43745 196 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 OR6A2O95222 327 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 LYPD3O95274 346 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 MT-ATP6P00846 226 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 IFNA2P01563 188 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 CD247P20963 164 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 NR4A2P43354 598 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 PPOXP50336 477 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 BIDP55957 195 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 PIGFQ07326 219 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 DAG1Q14118 895 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 KRT80Q6KB66 452 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 PODNL1Q6PEZ8 512 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 PATL1Q86TB9 770 aaKnown RBP13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 ZCCHC24Q8N2G6 241 aaKnown RBP13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 OR5J2Q8NH18 312 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 OR10A6Q8NH74 314 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 SLC26A7Q8TE54 656 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 ADAMTS16Q8TE57 1224 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 TAMM41Q96BW9 452 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF442Q9H7R0 627 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
EXOSC4-203ENST00000527954 SONP18583 2426 aaKnown RBP13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 SH3PXD2BA1X283 911 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 KPNA4O00629 521 aaPredicted RBP13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 FBP2O00757 339 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 CH25HO95992 272 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 IFNGR1P15260 489 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 B4GALT1P15291 398 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 PCGF2P35227 344 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 SNTB2Q13425 540 aaKnown RBP13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 METTL21CQ5VZV1 264 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 TTC33Q6PID6 262 aaPredicted RBP13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 TSPYL5Q86VY4 417 aaPredicted RBP13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 SLC30A8Q8IWU4 369 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 DOK1Q99704 481 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 RAB1BQ9H0U4 201 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 CDC42EP3Q9UKI2 254 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 SLC7A7Q9UM01 511 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 ABCA1O95477 2261 aa13.12□□□□□ -0.31
EXOSC4-203ENST00000527954 IGHV4-61A0A0C4DH41 118 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 TRAPPC13A5PLN9 417 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 CSNK1A1P48729 337 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 GZMKP49863 264 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 GZMMP51124 257 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF74Q16587 644 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 VMACQ2NL98 169 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 IQCCQ4KMZ1 466 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 INTS11Q5TA45 600 aaKnown RBP13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 NANOGP8Q6NSW7 305 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 SLC35D2Q76EJ3 337 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF627Q7L945 461 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 SNX32Q86XE0 403 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 LRRC17Q8N6Y2 441 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 ARIH2OSQ8N7S6 290 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 SPATA3Q8NHX4 192 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF75AQ96N20 296 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 FOXB1Q99853 325 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 SIKE1Q9BRV8 207 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 TMEM120AQ9BXJ8 343 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 BEX2Q9BXY8 128 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 NANOGQ9H9S0 305 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 MYOZ1Q9NP98 299 aaPredicted RBP13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 ARGLU1Q9NWB6 273 aaPredicted RBP13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 TAS2R5Q9NYW4 299 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF224Q9NZL3 707 aa13.11□□□□□ -0.31
EXOSC4-203ENST00000527954 RNF13O43567 381 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 LMX1BO60663 402 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 STAMBPO95630 424 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 IGFBP1P08833 259 aaPredicted RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 PATE4P0C8F1 98 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 FAM157CP0CG43 387 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 H2AFXP16104 143 aaPredicted RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 ZNF14P17017 642 aaPredicted RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 NR4A1P22736 598 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 GIPRP48546 466 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 CRYBA2P53672 197 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 RAB1AP62820 205 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 ZP4Q12836 540 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 CYLC2Q14093 348 aaPredicted RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 MELKQ14680 651 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 TRMT5Q32P41 509 aaKnown RBP13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 CDK20Q8IZL9 346 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 OR6X1Q8NH79 312 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 TMEM54Q969K7 222 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 PRSS27Q9BQR3 290 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 BPESC1Q9GZL8 116 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 DYNLRB1Q9NP97 96 aa13.1□□□□□ -0.31
EXOSC4-203ENST00000527954 NANSQ9NR45 359 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms