RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 SPTBN1Q01082 2364 aaKnown RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 IGKV1D-43A0A0B4J1Z2 117 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 FAM90A27PA6NNH2 459 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 RPL36A-HNRNPH2H7BZ11 118 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 DLGAP1O14490 977 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 BHLHE40O14503 412 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 ARPC3O15145 178 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 TRMUO75648 421 aaKnown RBP9.49□□□□□ -0.89
NEDD8-205ENST00000527046 SMNDC1O75940 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
NEDD8-205ENST00000527046 NDUFB2O95178 105 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 ADAP00813 363 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 CD14P08571 375 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 ITGA5P08648 1049 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 PGA4P0DJD7 388 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 PGA3P0DJD8 388 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 FCGR1AP12314 374 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 COX5AP20674 150 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 GTF2E2P29084 291 aaKnown RBP9.49□□□□□ -0.89
NEDD8-205ENST00000527046 POLR2IP36954 125 aaKnown RBP9.49□□□□□ -0.89
NEDD8-205ENST00000527046 BIDP55957 195 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 PRPS1P60891 318 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 CAMK2DQ13557 499 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 C1DQ13901 141 aaKnown RBP9.49□□□□□ -0.89
NEDD8-205ENST00000527046 TSC22D1Q15714 1073 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 FBXW9Q5XUX1 488 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 NIPAL3Q6P499 406 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 SMARCD3Q6STE5 483 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 STAC2Q6ZMT1 411 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 OR4Q3Q8NH05 313 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 BOD1Q96IK1 185 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 LRR1Q96L50 414 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 Q96M85 177 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 KATNB1Q9BVA0 655 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 LINC00470Q9BZP3 86 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 KCNJ16Q9NPI9 418 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 PARPBPQ9NWS1 579 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 GALNT8Q9NY28 637 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 EMC3Q9P0I2 261 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 C6orf203Q9P0P8 240 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-205ENST00000527046 MALT1Q9UDY8 824 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 OAZ3Q9UMX2 235 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 IER3IP1Q9Y5U9 82 aa9.49□□□□□ -0.89
NEDD8-205ENST00000527046 ICE1Q9Y2F5 2266 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SAC3D1A6NKF1 404 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 G3V2T6 193 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SOCS2O14508 198 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 E2F6O75461 281 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SERPINI2O75830 405 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 OR6A2O95222 327 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SOX14O95416 240 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 BCL10O95999 233 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ANXA8P13928 327 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ANPEPP15144 967 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ACADSP16219 412 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 IFNGR2P38484 337 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 CD79BP40259 229 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ASCL1P50553 236 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 RPL27P61353 136 aaKnown RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 EFNB1P98172 346 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 CDK5Q00535 292 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 COX10Q12887 443 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 MESTQ5EB52 335 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SFRP5Q5T4F7 317 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ACSM5Q6NUN0 579 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SEZ6L2Q6UXD5 910 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 DPY19L2P2Q6ZN68 376 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 Q6ZT83 130 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 PTCHD4Q6ZW05 846 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 STK32CQ86UX6 486 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 CXorf67Q86X51 503 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 HIPK1Q86Z02 1210 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF100Q8IYN0 542 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF433Q8N7K0 673 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ARIH2OSQ8N7S6 290 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 APH1AQ96BI3 265 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 RASD2Q96D21 266 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SLC25A44Q96H78 314 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 MUS81Q96NY9 551 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 RBM24Q9BX46 236 aaKnown RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 SLCO5A1Q9H2Y9 848 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 ELOVL5Q9NYP7 299 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 KLF2Q9Y5W3 355 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 CDH10Q9Y6N8 788 aa9.48□□□□□ -0.89
NEDD8-205ENST00000527046 GCN1Q92616 2671 aaKnown RBP9.48□□□□□ -0.89
NEDD8-205ENST00000527046 DOPEY2Q9Y3R5 2298 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 EEF1E1-BLOC1S5C9J1V9 151 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 DCTN6O00399 190 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 EEF1E1O43324 174 aaKnown RBP9.47□□□□□ -0.89
NEDD8-205ENST00000527046 MGRN1O60291 552 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 PPP1R3DO95685 299 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 ALPLP05186 524 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 SCG5P05408 212 aa9.47□□□□□ -0.89
NEDD8-205ENST00000527046 THBDP07204 575 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms