RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 MOKQ9UQ07 419 aa14.82□□□□□ -0.04
CCS-203ENST00000526058 SNX13Q9Y5W8 968 aa14.82□□□□□ -0.04
CCS-203ENST00000526058 CSPG4Q6UVK1 2322 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 ZNF99A8MXY4 864 aaPredicted RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 BLOC1S5-TXNDC5H3BN57 136 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 ZNF682O95780 498 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 HIST1H2ABP04908 130 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 HOXB1P14653 301 aaPredicted RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 FUT1P19526 365 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 RBM34P42696 430 aaKnown RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 YAP1P46937 504 aaKnown RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 FABP6P51161 128 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 PSME3P61289 254 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 MELKQ14680 651 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 HIST3H2AQ7L7L0 130 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 NANOGNBQ7Z5D8 188 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 OR6N1Q8NGY5 312 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 TMEM239Q8WW34 195 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 LZICQ8WZA0 190 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 HIST1H2ACQ93077 130 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 TRMT61AQ96FX7 289 aaKnown RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 GRIP2Q9C0E4 1043 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 SEC61A2Q9H9S3 476 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 CRNNQ9UBG3 495 aaPredicted RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 ABCD2Q9UBJ2 740 aa14.81□□□□□ -0.04
CCS-203ENST00000526058 GDF2Q9UK05 429 aaPredicted RBP14.81□□□□□ -0.04
CCS-203ENST00000526058 J3KTA2 159 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 SMAD7O15105 426 aaKnown RBP14.8□□□□□ -0.04
CCS-203ENST00000526058 PIP5K1CO60331 668 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 IGHV4-39P01824 125 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 CELA3BP08861 270 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 CECR9P0C854 216 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 THRBP10828 461 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 NCK1P16333 377 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 PRDX6P30041 224 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 CSNK1A1P48729 337 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 RIPPLY3P57055 190 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 LSM11P83369 360 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCS-203ENST00000526058 C11orf71Q6IPW1 123 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 CBLL1Q75N03 491 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 MYPOPQ86VE0 399 aaPredicted RBP14.8□□□□□ -0.04
CCS-203ENST00000526058 FBXL14Q8N1E6 418 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 MUC15Q8N387 334 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 OR6X1Q8NH79 312 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 SGTBQ96EQ0 304 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 COX4I2Q96KJ9 171 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 PRRC1Q96M27 445 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 KCTD14Q9BQ13 255 aaPredicted RBP14.8□□□□□ -0.04
CCS-203ENST00000526058 BDH2Q9BUT1 245 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 ULBP2Q9BZM5 246 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 B3GAT2Q9NPZ5 323 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 CBLN4Q9NTU7 201 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 RHCGQ9UBD6 479 aa14.8□□□□□ -0.04
CCS-203ENST00000526058 OR7A10O76100 309 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 SERPINA1P01009 418 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 IGKV3-15P01624 115 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 IGLV1-44P01699 117 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 CBR1P16152 277 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 CAPZA2P47755 286 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 NAAAQ02083 359 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 RPL18Q07020 188 aaKnown RBP14.79□□□□□ -0.04
CCS-203ENST00000526058 ST3GAL3Q11203 375 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 ARFGEF3Q5TH69 2177 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 ZNF544Q6NX49 715 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 Q71RC1 249 aaPredicted RBP14.79□□□□□ -0.04
CCS-203ENST00000526058 BIVMQ86UB2 503 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 TMEM54Q969K7 222 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 HSH2DQ96JZ2 352 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 ADAD1Q96M93 576 aaKnown RBP14.79□□□□□ -0.04
CCS-203ENST00000526058 HS6ST2Q96MM7 605 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 CACNG6Q9BXT2 260 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 POFUT2Q9Y2G5 429 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 MED31Q9Y3C7 131 aa14.79□□□□□ -0.04
CCS-203ENST00000526058 FFAR1O14842 300 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 IGF2P01344 180 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 IFNW1P05000 195 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 F13BP05160 661 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 B4GALT1P15291 398 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 PAX7P23759 505 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 CALCRP30988 508 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 APOBEC3AP31941 199 aaPredicted RBP14.78□□□□□ -0.04
CCS-203ENST00000526058 ACVR1BP36896 505 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 AQP2P41181 271 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 IDH3GP51553 393 aaPredicted RBP14.78□□□□□ -0.04
CCS-203ENST00000526058 TNK1Q13470 666 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 CLEC12BQ2HXU8 276 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 C3orf36Q3SXR2 165 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 ZNF813Q6ZN06 617 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 ZNF627Q7L945 461 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 PIGWQ7Z7B1 504 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 MDP1Q86V88 176 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 RNF148Q8N7C7 305 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 FAM169BQ8N8A8 192 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 RBM15BQ8NDT2 890 aaKnown RBP14.78□□□□□ -0.04
CCS-203ENST00000526058 MOSPD2Q8NHP6 518 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 LIPHQ8WWY8 451 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 FAM162AQ96A26 154 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 KATNB1Q9BVA0 655 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 NOX3Q9HBY0 568 aa14.78□□□□□ -0.04
CCS-203ENST00000526058 MAN2C1Q9NTJ4 1040 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms