RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 CYP2R1Q6VVX0 501 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 ZNF730Q6ZMV8 503 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 ZNF627Q7L945 461 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 PIWIL3Q7Z3Z3 882 aaKnown RBP11.34□□□□□ -0.59
CTSB-209ENST00000525315 CDK20Q8IZL9 346 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 LILRB1Q8NHL6 650 aaPredicted RBP11.34□□□□□ -0.59
CTSB-209ENST00000525315 MOSPD2Q8NHP6 518 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 MCUR1Q96AQ8 359 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
CTSB-209ENST00000525315 ALKBH3Q96Q83 286 aaPredicted RBP11.34□□□□□ -0.59
CTSB-209ENST00000525315 NELFAQ9H3P2 528 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 CRLF2Q9HC73 371 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 OBP2BQ9NPH6 170 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 INIPQ9NRY2 104 aa11.34□□□□□ -0.59
CTSB-209ENST00000525315 ARPC4-TTLL3A0A0A6YYG9 625 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 A0A1W2PR80 420 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 A0A1W2PRG6 482 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 TCRBV5S2A0A599 114 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 NPIPB13A6NJU9 1138 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 NPIPB4C9JG80 1138 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 M0R3G1 203 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 ACOT8O14734 319 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 PTP4A3O75365 173 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 SERPINI2O75830 405 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 PDE5AO76074 875 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 ATE1O95260 518 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 RAF1P04049 648 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 F13BP05160 661 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 FABP3P05413 133 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 CD3EP07766 207 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 CDH2P19022 906 aaPredicted RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 ATP6V1B2P21281 511 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 DNASE1P24855 282 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 SLC9A3P48764 834 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 SMIM11AP58511 58 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 PRPS1P60891 318 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 RPS4XP62701 263 aaKnown RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 TRAP1Q12931 704 aaKnown RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 BNIP1Q12981 228 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 ACKR1Q16570 336 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 TBRG1Q3YBR2 411 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 HIKESHIQ53FT3 197 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 CARD17Q5XLA6 110 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 ZNF704Q6ZNC4 412 aaPredicted RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 RRM2BQ7LG56 351 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 DHFR2Q86XF0 187 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 ZDHHC21Q8IVQ6 265 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 LRRC75AQ8NAA5 344 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 POP5Q969H6 163 aaKnown RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 MBD6Q96DN6 1003 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 ASB9Q96DX5 294 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 CLPTM1LQ96KA5 538 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 TNFRSF13CQ96RJ3 184 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 BTBD10Q9BSF8 475 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 THTPAQ9BU02 230 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 MRPL13Q9BYD1 178 aaKnown RBP11.33□□□□□ -0.6
CTSB-209ENST00000525315 B3GAT2Q9NPZ5 323 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 GLTPQ9NZD2 209 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 V9GYQ6 96 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 PLCE1Q9P212 2302 aa11.33□□□□□ -0.6
CTSB-209ENST00000525315 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 ZNF99A8MXY4 864 aaPredicted RBP11.32□□□□□ -0.6
CTSB-209ENST00000525315 EFCAB9A8MZ26 197 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 CENPBD1B2RD01 187 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 CDC42EP2O14613 210 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 GYG2O15488 501 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 CLOCKO15516 846 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 WNT11O96014 354 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 PGA3P0DJD8 388 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 CD53P19397 219 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 PTAFRP25105 342 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 OMPP47874 163 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 CSNK1A1P48729 337 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 HMGA2P52926 109 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 MELKQ14680 651 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 SEC23BQ15437 767 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 TAF11Q15544 211 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 TESK1Q15569 626 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 HIST3H3Q16695 136 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 ARMC4Q5T2S8 1044 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 LRFN4Q6PJG9 635 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 KLHL17Q6TDP4 642 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 OAFQ86UD1 273 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
CTSB-209ENST00000525315 OR6N1Q8NGY5 312 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 ASB10Q8WXI3 467 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 ZNF566Q969W8 418 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 SEPHS2Q99611 448 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 TXNIPQ9H3M7 391 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 MAGIXQ9H6Y5 334 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 CCM2LQ9NUG4 571 aaPredicted RBP11.32□□□□□ -0.6
CTSB-209ENST00000525315 CRNNQ9UBG3 495 aaPredicted RBP11.32□□□□□ -0.6
CTSB-209ENST00000525315 MGAT4BQ9UQ53 548 aa11.32□□□□□ -0.6
CTSB-209ENST00000525315 TMEM5Q9Y2B1 443 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms