RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 PPP1R3CQ9UQK1 317 aa6.61□□□□□ -1.35
PUM1-213ENST00000524516 REXO2Q9Y3B8 237 aaKnown RBP6.61□□□□□ -1.35
PUM1-213ENST00000524516 SMAD5-AS1Q9Y6J3 95 aa6.61□□□□□ -1.35
PUM1-213ENST00000524516 FBP2O00757 339 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 ZNF500O60304 480 aaPredicted RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 SCN2BO60939 215 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 MFAP3LO75121 409 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 UBL3O95164 117 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 CSTAP01040 98 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 PDYNP01213 254 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 TPM3P06753 285 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 LIPFP07098 398 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 CD55P08174 381 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 B4GALT1P15291 398 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 TSPAN8P19075 237 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 TNFSF4P23510 183 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 MMP15P51511 669 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 CLDN17P56750 224 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 C2orf80Q0P641 193 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 CEACAM7Q14002 265 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 DCST2Q5T1A1 773 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 PDZK1Q5T2W1 519 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 WDR25Q64LD2 544 aaPredicted RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 ZNF551Q7Z340 670 aaPredicted RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 PAQR4Q8N4S7 273 aaPredicted RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 PNLDC1Q8NA58 520 aaKnown RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 OR1J1Q8NGS3 322 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 HOXB13Q92826 284 aaPredicted RBP6.6□□□□□ -1.35
PUM1-213ENST00000524516 PMM1Q92871 262 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 SIGLEC11Q96RL6 698 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 ATOH8Q96SQ7 321 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 NAT9Q9BTE0 207 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 BRF2Q9HAW0 419 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 A4GALTQ9NPC4 353 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 VPS29Q9UBQ0 182 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 MAB21L2Q9Y586 359 aa6.6□□□□□ -1.35
PUM1-213ENST00000524516 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 TMED7-TICAM2A0A0A6YYA0 188 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 A0A1W2PRD5 423 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 A0A1W2PRF3 423 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 A0A1W2PRM7 423 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 TCRBV4S1A1TA0A5B7 111 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 SYCE1LA8MT33 242 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 M0R3G1 203 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 OR7A17O14581 309 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 WISP3O95389 354 aaPredicted RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 KRT14P02533 472 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 SERPINA5P05154 406 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 ADH4P08319 380 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 STMN1P16949 149 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 EEF1B2P24534 225 aaKnown RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 LIPAP38571 399 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 FNTAP49354 379 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 CDH13P55290 713 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 UCP2P55851 309 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 ACSM2AQ08AH3 577 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 PRSS53Q2L4Q9 553 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 TBC1D28Q2M2D7 210 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 ZNF718Q3SXZ3 478 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 SPATA46Q5T0L3 261 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 CD276Q5ZPR3 534 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 ACSM2BQ68CK6 577 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 OVCH2Q7RTZ1 564 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 VANGL1Q8TAA9 524 aaPredicted RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 SLC7A13Q8TCU3 470 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 NPRL2Q8WTW4 380 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 DCAKDQ8WVC6 231 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 GIMAP5Q96F15 307 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 PRPF18Q99633 342 aaKnown RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 TMEM246Q9BRR3 403 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 TAPBPLQ9BX59 468 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 IQCGQ9H095 443 aaKnown RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 FAM234AQ9H0X4 552 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 SIRPDQ9H106 197 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 RHOJQ9H4E5 214 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 MSL2Q9HCI7 577 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 CGGBP1Q9UFW8 167 aaPredicted RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 POFUT2Q9Y2G5 429 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 TMED7Q9Y3B3 224 aa6.59□□□□□ -1.35
PUM1-213ENST00000524516 TSSC4Q9Y5U2 329 aaPredicted RBP6.59□□□□□ -1.35
PUM1-213ENST00000524516 TMEM72A0PK05 275 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 ZC3H12DA2A288 527 aaKnown RBP6.58□□□□□ -1.36
PUM1-213ENST00000524516 TMEM178BH3BS89 294 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 DNAJA2O60884 412 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 VAMP5O95183 116 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 LY86O95711 162 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 ANXA4P09525 319 aaPredicted RBP6.58□□□□□ -1.36
PUM1-213ENST00000524516 IFI6P09912 130 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 TACR3P29371 465 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 MPV17P39210 176 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 ECI1P42126 302 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 ALDH18A1P54886 795 aaKnown RBP6.58□□□□□ -1.36
PUM1-213ENST00000524516 ARF6P62330 175 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 RAE1P78406 368 aaKnown RBP6.58□□□□□ -1.36
PUM1-213ENST00000524516 CD83Q01151 205 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 HP1BP3Q5SSJ5 553 aaPredicted RBP6.58□□□□□ -1.36
PUM1-213ENST00000524516 VMO1Q7Z5L0 202 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 ISCA2Q86U28 154 aa6.58□□□□□ -1.36
PUM1-213ENST00000524516 VRK2Q86Y07 508 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms