RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 RPA2P15927 270 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CSF2RBP32927 897 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 DIO1P49895 249 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 B2MP61769 119 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 LCN6P62502 163 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SQSTM1Q13501 440 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 EIF2B1Q14232 305 aaKnown RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 DND1Q8IYX4 353 aaKnown RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 GABRG1Q8N1C3 465 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CD300LFQ8TDQ1 290 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 PPP1R1CQ8WVI7 109 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 THRSPQ92748 146 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 ARRDC3Q96B67 414 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CMTM3Q96MX0 182 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SLC25A21Q9BQT8 299 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SPHK1Q9NYA1 384 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 ZMIZ1Q9ULJ6 1067 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 NPTNQ9Y639 398 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 FNDC1Q4ZHG4 1894 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 H7C417 338 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 H2BFSP57053 126 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 S100A12P80511 92 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 EFNB1P98172 346 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CDK3Q00526 305 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SLC16A13Q7RTY0 426 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 PXKQ7Z7A4 578 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 TMEM200AQ86VY9 491 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CAMKVQ8NCB2 501 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 STK35Q8TDR2 534 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 TCTEX1D2Q8WW35 142 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 FAM3DQ96BQ1 224 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 C14orf79Q96F83 325 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 FOXN4Q96NZ1 517 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 REG4Q9BYZ8 158 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 MTFP1Q9UDX5 166 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SFTPBP07988 381 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 THBS1P07996 1170 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SNRNP70P08621 437 aaKnown RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CPMP14384 443 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SPI1P17947 270 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 RPS27P42677 84 aaKnown RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 KCNJ3P48549 501 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 MAT1AQ00266 395 aaKnown RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 DUSP2Q05923 314 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 DUSP8Q13202 625 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 PRRT3Q5FWE3 981 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 C3orf33Q6P1S2 294 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 DPY19L4Q7Z388 723 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 ZNF547Q8IVP9 402 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 YAF2Q8IY57 180 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 ZNF101Q8IZC7 436 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 OR6N1Q8NGY5 312 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 OR14C36Q8NHC7 312 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 GAL3ST3Q96A11 431 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 Q96M85 177 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 TSSK2Q96PF2 358 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 NKX3-1Q99801 234 aaPredicted RBP8.28□□□□□ -1.08
CSMD1-212ENST00000523387 Q9N2J8 555 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 SLC22A11Q9NSA0 550 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 CENPMQ9NSP4 180 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 KCMF1Q9P0J7 381 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 ST6GALNAC2Q9UJ37 374 aa8.28□□□□□ -1.08
CSMD1-212ENST00000523387 TMEM218A2RU14 115 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 OGG1O15527 345 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 GALR3O60755 368 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 F13BP05160 661 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 TMIGD3P0DMS9 266 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 MAOAP21397 527 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 S100A2P29034 98 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 OR3A2P47893 321 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 NR0B1P51843 470 aaKnown RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 ARFRP1Q13795 201 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 KCNAB1Q14722 419 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 DHCR24Q15392 516 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 ARHGAP11BQ3KRB8 267 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 ULK3Q6PHR2 472 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 VITQ6UXI7 678 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 OR1J2Q8NGS2 313 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 PHOSPHO1Q8TCT1 267 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 ARL5BQ96KC2 179 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 SLC19A3Q9BZV2 496 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 ZNF275Q9NSD4 429 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 RPH3AQ9Y2J0 694 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 TBC1D3DA0A087WVF3 549 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 TBC1D3IA0A087WXS9 549 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 TSPAN11A1L157 253 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 TBC1D3LB9A6J9 549 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 DNASE2O00115 360 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 XRCC3O43542 346 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 IFNA4P05014 189 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 FABP1P07148 127 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 TBC1D3HP0C7X1 549 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
CSMD1-212ENST00000523387 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
CSMD1-212ENST00000523387 SNRPEP62304 92 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms