RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RNF130Q86XS8 419 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 DDIASQ8IXT1 998 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 ZSCAN4Q8NAM6 433 aaPredicted RBP11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 OR2T11Q8NH01 316 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 C11orf40Q8WZ69 217 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 NEURL3Q96EH8 262 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 DCLRE1CQ96SD1 692 aaKnown RBP11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 PRPF18Q99633 342 aaKnown RBP11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 OR51B6Q9H340 312 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 POLE3Q9NRF9 147 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 EXD2Q9NVH0 621 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 FBXL3Q9UKT7 428 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 A8MVM7 634 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 FTCDNL1E5RQL4 147 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 SLC28A1O00337 649 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 SPRY3O43610 288 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 NPIPB7O75200 414 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 MPIG6BO95866 241 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 INHBAP08476 426 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 TFPTP0C1Z6 253 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 PNMTP11086 282 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 FUT4P22083 530 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 SOAT1P35610 550 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 BPIFB3P59826 476 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 HBA1P69905 142 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 EPS8Q12929 822 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 CAMK2DQ13557 499 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 MOGQ16653 247 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 GSTA3Q16772 222 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 ZDHHC24Q6UX98 284 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 CCNYL1Q8N7R7 359 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 FGFBP3Q8TAT2 258 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 PHF21AQ96BD5 680 aa11.61□□□□□ -0.55
NKX3-1-202ENST00000523261 CFAP73A6NFT4 308 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 GPR37O15354 613 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 CRCPO75575 148 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 UBL3O95164 117 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 TGDSO95455 350 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 PATE4P0C8F1 98 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 UROSP10746 265 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 CCL2P13500 99 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 DRD4P21917 467 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 SERPINB9P50453 376 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 MMP15P51511 669 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 CLEC6AQ6EIG7 209 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 LRRC28Q86X40 367 aaPredicted RBP11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 C20orf196Q8IYI0 205 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 C1orf174Q8IYL3 243 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 CLEC4FQ8N1N0 589 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 CPEB3Q8NE35 698 aaKnown RBP11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 SLC30A7Q8NEW0 376 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 MIPOL1Q8TD10 442 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 GEMIN6Q8WXD5 167 aaKnown RBP11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 ROPN1LQ96C74 230 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 SLC35G5Q96KT7 338 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 OXGR1Q96P68 337 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 EGLN1Q9GZT9 426 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 OR51I1Q9H343 314 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 LRCH1Q9Y2L9 728 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 TMED5Q9Y3A6 229 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 RYR2Q92736 4967 aa11.6□□□□□ -0.55
NKX3-1-202ENST00000523261 IGHV2-70DA0A0C4DH43 119 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 ZSCAN5BA6NJL1 495 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 H3BQF6 201 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 K7EIL1 84 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 CFLARO15519 480 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 RAD51CO43502 376 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 PPP1R3DO95685 299 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 GSTA1P08263 222 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 ADH4P08319 380 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 OR12D1P0DN82 309 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 UQCRBP14927 111 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 RPL3P39023 403 aaKnown RBP11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 CAV1Q03135 178 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 DBPQ10586 325 aaPredicted RBP11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 PMS2P3Q13401 168 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 ZMYND11Q15326 602 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 TMEM255AQ5JRV8 349 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 ATAD3BQ5T9A4 648 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 C6orf89Q6UWU4 347 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 MFSD8Q8NHS3 518 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 TBC1D15Q8TC07 691 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 XAGE5Q8WWM1 108 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 RAB40AQ8WXH6 277 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 PAFAH2Q99487 392 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 TCF7L2Q9NQB0 619 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 POFUT2Q9Y2G5 429 aa11.59□□□□□ -0.55
NKX3-1-202ENST00000523261 PRAMEF27A3QJZ7 478 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 TNFRSF13BO14836 293 aaPredicted RBP11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 LSM1O15116 133 aaKnown RBP11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 MFN2O95140 757 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 SNAP29O95721 258 aa11.58□□□□□ -0.56
NKX3-1-202ENST00000523261 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms