RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TFGQ92734 400 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-216ENST00000523088 MALSU1Q96EH3 234 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 CNTNAP3BQ96NU0 1288 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 OR8B4Q96RC9 309 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 EGFL8Q99944 293 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 ALG12Q9BV10 488 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 ELOVL1Q9BW60 279 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-216ENST00000523088 FSD1LQ9BXM9 530 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 CNTNAP3Q9BZ76 1288 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 CHST5Q9GZS9 411 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 PPIL3Q9H2H8 161 aaKnown RBP6.89□□□□□ -1.31
HDAC3-216ENST00000523088 UBQLN3Q9H347 655 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 ERVK13-1Q9NX77 482 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 RASL12Q9NYN1 266 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 RCC2Q9P258 522 aaKnown RBP6.89□□□□□ -1.31
HDAC3-216ENST00000523088 PTGFRNQ9P2B2 879 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 HSPB7Q9UBY9 170 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 MRTO4Q9UKD2 239 aaKnown RBP6.89□□□□□ -1.31
HDAC3-216ENST00000523088 FLVCR2Q9UPI3 526 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 LIPGQ9Y5X9 500 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 EPG5Q9HCE0 2579 aa6.89□□□□□ -1.31
HDAC3-216ENST00000523088 NUMA1Q14980 2115 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TRAV8-7A0A075B6U6 113 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CXorf51AA0A1B0GTR3 108 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 UBA6A0AVT1 1052 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 NPIPB15A6NHN6 443 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 PATE3B3GLJ2 98 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 SEC14L6B5MCN3 397 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 ORC5O43913 435 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CDC40O60508 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 FCMRO60667 390 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CLDN11O75508 207 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 ADAP1O75689 374 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 GABARAPO95166 117 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 SEMA4FO95754 770 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 HPP00738 406 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 HPRP00739 348 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 SERPIND1P05546 499 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 HOXB5P09067 269 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 NR2F6P10588 404 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TBPP20226 339 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 GZMHP20718 246 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 HOXA5P20719 270 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 MAKP20794 623 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 FGF7P21781 194 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CDX1P47902 265 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TTPAP49638 278 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 PNLIPRP2P54317 469 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 ATP5J2P56134 94 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 OR4D2P58180 307 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 POU4F1Q01851 419 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 PLAURQ03405 335 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 KLF10Q13118 480 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 NME3Q13232 169 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CCNIQ14094 377 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 ELAVL3Q14576 367 aaKnown RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 POU2AF1Q16633 256 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TAZQ16635 292 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 XKR7Q5GH72 579 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 HIST2H3PS2Q5TEC6 136 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 DCAF12L1Q5VU92 463 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 MBNL2Q5VZF2 373 aaKnown RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM215Q68D42 235 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM88Q6PEY1 159 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 ACOT7LQ6ZUV0 252 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 LANCL3Q6ZV70 420 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 PIP4P1Q86T03 277 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 SERPINA9Q86WD7 417 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CHSY1Q86X52 802 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CRLF3Q8IUI8 442 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 SERPINA12Q8IW75 414 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 NXPE1Q8N323 547 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TEX26Q8N6G2 289 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 OR1K1Q8NGR3 316 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 OR6K3Q8NGY3 331 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 OR2T11Q8NH01 316 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 KCNG3Q8TAE7 436 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CLEC4CQ8WTT0 213 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 NDRG1Q92597 394 aaKnown RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 FAM46BQ96A09 425 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 CPNE2Q96FN4 548 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 RNF157Q96PX1 679 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 OR5B12Q96R08 314 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 AARSD1Q9BTE6 412 aaKnown RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 GPR174Q9BXC1 333 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TSPAN10Q9H1Z9 355 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 MTHFD2LQ9H903 347 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 APMAPQ9HDC9 416 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 SSU72Q9NP77 194 aaKnown RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 THSD1Q9NS62 852 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM74BQ9NUR3 256 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 LGALS13Q9UHV8 139 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 MRM2Q9UI43 246 aaKnown RBP6.88□□□□□ -1.31
HDAC3-216ENST00000523088 RIMS3Q9UJD0 308 aa6.88□□□□□ -1.31
HDAC3-216ENST00000523088 ZNF223Q9UK11 482 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms