RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SCARB2Q14108 478 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 RAB39AQ14964 217 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
MRPS28-209ENST00000522987 GKAP1Q5VSY0 366 aaPredicted RBP13.28□□□□□ -0.28
MRPS28-209ENST00000522987 LIPNQ5VXI9 398 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 ULK3Q6PHR2 472 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 DHRS4L2Q6PKH6 230 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 EPGNQ6UW88 154 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 KRT73Q86Y46 540 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 LSMEM1Q8N8F7 131 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 SMYD1Q8NB12 490 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 FGFBP3Q8TAT2 258 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 DNAJA4Q8WW22 397 aaPredicted RBP13.28□□□□□ -0.28
MRPS28-209ENST00000522987 MRPL24Q96A35 216 aaKnown RBP13.28□□□□□ -0.28
MRPS28-209ENST00000522987 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 C12orf10Q9HB07 376 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 TMEM27Q9HBJ8 222 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 B3GAT2Q9NPZ5 323 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF224Q9NZL3 707 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 REV1Q9UBZ9 1251 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 SLC13A4Q9UKG4 626 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF726A6NNF4 738 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 M0R233 179 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-209ENST00000522987 TCF21O43680 179 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 NAT2P11245 290 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 ZNF14P17017 642 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-209ENST00000522987 BIDP55957 195 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 RAB1AP62820 205 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 PUDPQ08623 228 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 MELKQ14680 651 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 ELFN2Q5R3F8 820 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 NET1Q7Z628 596 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-209ENST00000522987 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.29
MRPS28-209ENST00000522987 ANKK1Q8NFD2 765 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 CLDND2Q8NHS1 167 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 ZNF75AQ96N20 296 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 FOXB1Q99853 325 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 MOV10Q9HCE1 1003 aaKnown RBP13.27□□□□□ -0.29
MRPS28-209ENST00000522987 SLCO1B3Q9NPD5 702 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 TESQ9UGI8 421 aaKnown RBP13.27□□□□□ -0.29
MRPS28-209ENST00000522987 DUSP13Q9UII6 198 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 PRDM4Q9UKN5 801 aa13.27□□□□□ -0.29
MRPS28-209ENST00000522987 A0A0B4J2E0 115 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 A0A1B0GX12 115 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 CPSF4LA6NMK7 179 aaKnown RBP13.26□□□□□ -0.29
MRPS28-209ENST00000522987 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 KPNA4O00629 521 aaPredicted RBP13.26□□□□□ -0.29
MRPS28-209ENST00000522987 PLPP3O14495 311 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 SYNGR3O43761 229 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 FZD7O75084 574 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 RAB36O95755 333 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 FAM157BP0CG42 384 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 ADORA3P0DMS8 318 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 CCL2P13500 99 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 ZNF35P13682 527 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 CSNK1A1P48729 337 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 IDH3AP50213 366 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 GALK2Q01415 458 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 AGKQ53H12 422 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 LRIF1Q5T3J3 769 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 BLOC1S3Q6QNY0 202 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 C5orf46Q6UWT4 87 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 ARMC8Q8IUR7 673 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 ADPRHL1Q8NDY3 354 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 VANGL1Q8TAA9 524 aaPredicted RBP13.26□□□□□ -0.29
MRPS28-209ENST00000522987 YIPF5Q969M3 257 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 SLC35B4Q969S0 331 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 TLCD1Q96CP7 247 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 THOC1Q96FV9 657 aaKnown RBP13.26□□□□□ -0.29
MRPS28-209ENST00000522987 SLC41A3Q96GZ6 507 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 EPYCQ99645 322 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 MCHR1Q99705 422 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 SPATA5L1Q9BVQ7 753 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
MRPS28-209ENST00000522987 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 TREM2Q9NZC2 230 aa13.26□□□□□ -0.29
MRPS28-209ENST00000522987 LOC102725191A0A1B0GVB3 256 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 A0A1W2PPW3 197 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 NCR1O76036 304 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 SLC6A2P23975 617 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 GPR6P46095 362 aaPredicted RBP13.25□□□□□ -0.29
MRPS28-209ENST00000522987 FAM91A1Q658Y4 838 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 NHLRC1Q6VVB1 395 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 WDR88Q6ZMY6 472 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 RBM45Q8IUH3 476 aaKnown RBP13.25□□□□□ -0.29
MRPS28-209ENST00000522987 SKA3Q8IX90 412 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 CCDC36Q8IYA8 594 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 RFLNBQ8N5W9 214 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 ICA1LQ8NDH6 482 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 IL17RDQ8NFM7 739 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 HPS1Q92902 700 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 ZNF607Q96SK3 696 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
MRPS28-209ENST00000522987 MRPL39Q9NYK5 338 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms