RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NOX3Q9HBY0 568 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 B3GAT2Q9NPZ5 323 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 USP22Q9UPT9 525 aa17.95■□□□□ 0.46
SDCBP-209ENST00000522243 IGHV2OR16-5A0A0B4J2B6 119 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 TRAPPC13A5PLN9 417 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 A8MV72 311 aaPredicted RBP17.94■□□□□ 0.46
SDCBP-209ENST00000522243 CSF3P09919 207 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 CD79AP11912 226 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 IFNGR1P15260 489 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 THBS4P35443 961 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 CRYBA2P53672 197 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 CARTPTQ16568 116 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF74Q16587 644 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 MMEL1Q495T6 779 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 LRRC58Q96CX6 371 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 LRR1Q96L50 414 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 MOV10Q9HCE1 1003 aaKnown RBP17.94■□□□□ 0.46
SDCBP-209ENST00000522243 FGFR1OP2Q9NVK5 253 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 FKBP7Q9Y680 259 aa17.94■□□□□ 0.46
SDCBP-209ENST00000522243 PDE5AO76074 875 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 TROVE2P10155 538 aaKnown RBP eCLIP17.93■□□□□ 0.46
SDCBP-209ENST00000522243 B4GALT1P15291 398 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 TNFRSF1BP20333 461 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 PDLIM4P50479 330 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 ARFIP2P53365 341 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 KLF10Q13118 480 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 MELKQ14680 651 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 EFNB3Q15768 340 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 REP15Q6BDI9 236 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 KRT80Q6KB66 452 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 CCDC36Q8IYA8 594 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 NUP37Q8NFH4 326 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 PROX1Q92786 737 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 MS4A3Q96HJ5 214 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 ECSITQ9BQ95 431 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 PLK3Q9H4B4 646 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 NANSQ9NR45 359 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 B3GNT2Q9NY97 397 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 TAS2R5Q9NYW4 299 aa17.93■□□□□ 0.46
SDCBP-209ENST00000522243 hCG_2039718K7EN88 272 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 FXYD1O00168 92 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 MRASO14807 208 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 SHOX2O60902 331 aaPredicted RBP17.92■□□□□ 0.46
SDCBP-209ENST00000522243 UMPSP11172 480 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 NPR2P20594 1047 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 CSNK1A1P48729 337 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 GSG1Q2KHT4 349 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 C6orf52Q5T4I8 152 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 CGB2Q6NT52 195 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 SLC35D2Q76EJ3 337 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 CCDC80Q76M96 950 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 SPATA21Q7Z572 469 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 CALHM3Q86XJ0 350 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 HIPK1Q86Z02 1210 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 SVOPLQ8N434 492 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 FOXB1Q99853 325 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 PRSS27Q9BQR3 290 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF442Q9H7R0 627 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 SH3GLB1Q9Y371 365 aa17.92■□□□□ 0.46
SDCBP-209ENST00000522243 LOC100653049A0A140TA62 436 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 SH3PXD2BA1X283 911 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 RNF13O43567 381 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 KRT34O76011 436 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 USF1P22415 310 aaPredicted RBP17.91■□□□□ 0.46
SDCBP-209ENST00000522243 PTDSS1P48651 473 aaKnown RBP17.91■□□□□ 0.46
SDCBP-209ENST00000522243 LSM11P83369 360 aaKnown RBP eCLIP17.91■□□□□ 0.46
SDCBP-209ENST00000522243 VLDLRP98155 873 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 SNTB2Q13425 540 aaKnown RBP17.91■□□□□ 0.46
SDCBP-209ENST00000522243 DAG1Q14118 895 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 GGTLC2Q14390 218 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 CARM1Q86X55 608 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 ZCCHC24Q8N2G6 241 aaKnown RBP17.91■□□□□ 0.46
SDCBP-209ENST00000522243 RASSF5Q8WWW0 418 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 MPP4Q96JB8 637 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 FOXN4Q96NZ1 517 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 SH3GL1Q99961 368 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 SAR1AQ9NR31 198 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF224Q9NZL3 707 aa17.91■□□□□ 0.46
SDCBP-209ENST00000522243 TMEM129A0AVI4 362 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 VSTM5A8MXK1 200 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 VWC2LB2RUY7 222 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 HIST1H2ABP04908 130 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 PATE4P0C8F1 98 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 PPOXP50336 477 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 ZP4Q12836 540 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 DEF8Q6ZN54 512 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 HIST3H2AQ7L7L0 130 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF627Q7L945 461 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 SNX32Q86XE0 403 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 IL17RDQ8NFM7 739 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 OR8J3Q8NGG0 315 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 OR6X1Q8NH79 312 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 HIST1H2ACQ93077 130 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 TMEM54Q969K7 222 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF75AQ96N20 296 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 DOK1Q99704 481 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 PIMREGQ9BSJ6 248 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 ZNF426Q9BUY5 554 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 PCDHAC1Q9H158 963 aa17.9■□□□□ 0.46
SDCBP-209ENST00000522243 MEPEQ9NQ76 525 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms