RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 RAB1BQ9H0U4 201 aa16.01■□□□□ 0.15
TOP1MT-216ENST00000522121 CDC42EP3Q9UKI2 254 aa16.01■□□□□ 0.15
TOP1MT-216ENST00000522121 LOC390937A0A1W2PQ73 354 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 TRAPPC13A5PLN9 417 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 ZNF503-AS2A6NEH8 195 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 C11orf98E9PRG8 122 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 hCG_2039718K7EN88 272 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 CD79AP11912 226 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 PCGF2P35227 344 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 THBS4P35443 961 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 CYLC2Q14093 348 aaPredicted RBP16■□□□□ 0.15
TOP1MT-216ENST00000522121 DAG1Q14118 895 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 GGTLC2Q14390 218 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 NHLRC1Q6VVB1 395 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 MYPOPQ86VE0 399 aaPredicted RBP16■□□□□ 0.15
TOP1MT-216ENST00000522121 ANKS4BQ8N8V4 417 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 ZNF540Q8NDQ6 660 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 ADAMTS16Q8TE57 1224 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 MPP4Q96JB8 637 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 SH3GL1Q99961 368 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 MRGBPQ9NV56 204 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 SLC7A7Q9UM01 511 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 CHD3Q12873 2000 aaKnown RBP16■□□□□ 0.15
TOP1MT-216ENST00000522121 ALPK2Q86TB3 2170 aa16■□□□□ 0.15
TOP1MT-216ENST00000522121 ABCA1O95477 2261 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 VWC2LB2RUY7 222 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 CH25HO95992 272 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 HLA-HP01893 362 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 HIST1H2ABP04908 130 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 CD247P20963 164 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 NR4A2P43354 598 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 CSNK1A1P48729 337 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 GZMKP49863 264 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 BIDP55957 195 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 NPTX1Q15818 432 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 VMACQ2NL98 169 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 HIST3H2AQ7L7L0 130 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 ZNF627Q7L945 461 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 CXXC5Q7LFL8 322 aaKnown RBP15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 SPATA21Q7Z572 469 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 HIST1H2ACQ93077 130 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 FOXB1Q99853 325 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 DENND2DQ9H6A0 471 aaPredicted RBP15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 NOX3Q9HBY0 568 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 NANSQ9NR45 359 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 TMEM160Q9NX00 188 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 B3GNT2Q9NY97 397 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 SPEF1Q9Y4P9 236 aa15.99■□□□□ 0.15
TOP1MT-216ENST00000522121 RNF13O43567 381 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 ENTPD5O75356 428 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 RAB36O95755 333 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 IGHV4-31P0DP07 118 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 IFNGR1P15260 489 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 B4GALT1P15291 398 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 PIGFQ07326 219 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 SNTB2Q13425 540 aaKnown RBP15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 ZNF74Q16587 644 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 TRMT5Q32P41 509 aaKnown RBP15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 IQCCQ4KMZ1 466 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 KRT80Q6KB66 452 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 SLC35D2Q76EJ3 337 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 RBM45Q8IUH3 476 aaKnown RBP15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 SVOPLQ8N434 492 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 NEU4Q8WWR8 484 aaPredicted RBP15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 TAMM41Q96BW9 452 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 FOXN4Q96NZ1 517 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 TMEM120AQ9BXJ8 343 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 BEX2Q9BXY8 128 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 SLC19A3Q9BZV2 496 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 DYNLRB1Q9NP97 96 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 FBXL3Q9UKT7 428 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 CMAHPQ9Y471 501 aa15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 SONP18583 2426 aaKnown RBP15.98■□□□□ 0.15
TOP1MT-216ENST00000522121 KPNA4O00629 521 aaPredicted RBP15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 UBL3O95164 117 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 TROVE2P10155 538 aaKnown RBP eCLIP15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 UMPSP11172 480 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 ZNF16P17020 682 aaPredicted RBP15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 NR4A1P22736 598 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 ZP4Q12836 540 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 MMEL1Q495T6 779 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 NANOGP8Q6NSW7 305 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 WDR88Q6ZMY6 472 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 CCDC80Q76M96 950 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 PIWIL3Q7Z3Z3 882 aaKnown RBP15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 OR4D11Q8NGI4 311 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 OR6X1Q8NH79 312 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 SPATA3Q8NHX4 192 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 DOK1Q99704 481 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 ECSITQ9BQ95 431 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 PCDHAC1Q9H158 963 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 NANOGQ9H9S0 305 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 LPAR3Q9UBY5 353 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 ZNF229Q9UJW7 825 aa15.97■□□□□ 0.15
TOP1MT-216ENST00000522121 SH3PXD2BA1X283 911 aa15.96■□□□□ 0.15
TOP1MT-216ENST00000522121 FBP2O00757 339 aa15.96■□□□□ 0.15
TOP1MT-216ENST00000522121 LYPD3O95274 346 aa15.96■□□□□ 0.15
TOP1MT-216ENST00000522121 NPPAP01160 153 aa15.96■□□□□ 0.15
TOP1MT-216ENST00000522121 THY1P04216 161 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms