RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 FUNDC2Q9BWH2 189 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 PARD6BQ9BYG5 372 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 AICDAQ9GZX7 198 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 DRC3Q9H069 523 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 SHARPINQ9H0F6 387 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 EHD1Q9H4M9 534 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 WDR76Q9H967 626 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 POU2F3Q9UKI9 436 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 ATG4BQ9Y4P1 393 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 RELNP78509 3460 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 PCSK5Q92824 1860 aa6.22□□□□□ -1.41
SPIDR-215ENST00000521798 MED13Q9UHV7 2174 aa6.21□□□□□ -1.41
SPIDR-215ENST00000521798 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 C15orf38-AP3S2A0A0A6YYH1 394 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 CLEC18AA5D8T8 446 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 C4orf51C9J302 202 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 GOLGA8RI6L899 631 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 TXNDC12O95881 172 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 IGHV4-39P01824 125 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 MT-ND2P03891 347 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 SMIM10L1P0DMW3 83 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 CA6P23280 308 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 ALDH3B1P43353 468 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 EFNA3P52797 238 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 SRSF4Q08170 494 aaKnown RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 GAGE5Q13069 117 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 GAGE6Q13070 117 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 DOC2AQ14183 400 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 LY6DQ14210 128 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 RBM39Q14498 530 aaKnown RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 RBBP5Q15291 538 aaKnown RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 NDUFA9Q16795 377 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 PDLIM3Q53GG5 364 aaPredicted RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 VWA2Q5GFL6 755 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 XKR6Q5GH73 641 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 IRAK1BP1Q5VVH5 260 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 OR4C11Q6IEV9 310 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 ADNP2Q6IQ32 1131 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 TMIGD1Q6UXZ0 262 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 C17orf107Q6ZR85 190 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 SHISA6Q6ZSJ9 500 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 ERASQ7Z444 233 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 PRIMA1Q86XR5 153 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 GCNT2Q8N0V5 402 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 TBC1D19Q8N5T2 526 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 NRACQ8N912 160 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 CLEC18CQ8NCF0 446 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 OR13C3Q8NGS6 347 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 OR9A4Q8NGU2 314 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 ACMSDQ8TDX5 336 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 APOBEC4Q8WW27 367 aaKnown RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 MCHR2Q969V1 340 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 TMEM45BQ96B21 275 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 BPIFA2Q96DR5 249 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 PHF21BQ96EK2 531 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 SMIM10Q96HG1 83 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 MARK4Q96L34 752 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 MRPL57Q9BQC6 102 aaKnown RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 EFCAB11Q9BUY7 163 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 CAPS2Q9BXY5 557 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 NT5DC2Q9H857 520 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 WDR54Q9H977 334 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 TMEM216Q9P0N5 145 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 OPTCQ9UBM4 332 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 ZNF282Q9UDV7 671 aaPredicted RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 CHRNA9Q9UGM1 479 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 FBXL4Q9UKA2 621 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 ZNF490Q9ULM2 529 aaPredicted RBP6.21□□□□□ -1.42
SPIDR-215ENST00000521798 FOXJ3Q9UPW0 622 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 SLC22A7Q9Y694 548 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 CCDC88CQ9P219 2028 aa6.21□□□□□ -1.42
SPIDR-215ENST00000521798 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 ASPDHA6ND91 283 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 ARGFXA6NJG6 315 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 SMIM23A6NLE4 172 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 A8MT66 165 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 HNRNPCL2B2RXH8 293 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 K7EQM0 130 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 SGK494L7N484 410 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 ARPC1BO15143 372 aaKnown RBP6.2□□□□□ -1.42
SPIDR-215ENST00000521798 MLNRO43193 412 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 GALR3O60755 368 aaPredicted RBP6.2□□□□□ -1.42
SPIDR-215ENST00000521798 DNAJB6O75190 326 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 CDH16O75309 829 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 RDH16O75452 317 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 SERPIND1P05546 499 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 SERPINA6P08185 405 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 GSTA1P08263 222 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 RPS17P08708 135 aaKnown RBP6.2□□□□□ -1.42
SPIDR-215ENST00000521798 MMP11P24347 488 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 CXCR2P25025 360 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 HTR2AP28223 471 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 PEX19P40855 299 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 SLC1A3P43003 542 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 CCR4P51679 360 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 IRF8Q02556 426 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 RGS1Q08116 209 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 EXOSC7Q15024 291 aaKnown RBP6.2□□□□□ -1.42
SPIDR-215ENST00000521798 LIPKQ5VXJ0 399 aa6.2□□□□□ -1.42
SPIDR-215ENST00000521798 ZYG11AQ6WRX3 759 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms