RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 B4GALT1P15291 398 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 LSP1P33241 339 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ALDH3B1P43353 468 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 PTDSS1P48651 473 aaKnown RBP12.79□□□□□ -0.36
PRKDC-204ENST00000521331 NCALDP61601 193 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 PIGFQ07326 219 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 PUDPQ08623 228 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 FXNQ16595 210 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 CEP85LQ5SZL2 805 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 SHQ1Q6PI26 577 aaKnown RBP12.79□□□□□ -0.36
PRKDC-204ENST00000521331 DHRS4L2Q6PKH6 230 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 CROCCP2Q86T23 111 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 KRT73Q86Y46 540 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 MIER2Q8N344 545 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 TEX29Q8N6K0 151 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ANKRD42Q8N9B4 389 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 OR6N1Q8NGY5 312 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 OR51F2Q8NH61 342 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ZNF418Q8TF45 676 aaPredicted RBP12.79□□□□□ -0.36
PRKDC-204ENST00000521331 FOXB1Q99853 325 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 SYT3Q9BQG1 590 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 EMC6Q9BV81 110 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 SPATA5L1Q9BVQ7 753 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ZNF416Q9BWM5 594 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 PAIP1Q9H074 479 aaKnown RBP12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ZNF385DQ9H6B1 395 aa12.79□□□□□ -0.36
PRKDC-204ENST00000521331 TESQ9UGI8 421 aaKnown RBP12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
PRKDC-204ENST00000521331 ENTPD5O75356 428 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 TCN1P20061 433 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-204ENST00000521331 COL8A2P25067 703 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 GIPRP48546 466 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 RAB1AP62820 205 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 PMS2P3Q13401 168 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 OR9I1Q8NGQ6 314 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 RNF217Q8TC41 542 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 ZMYND19Q96E35 227 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-204ENST00000521331 PLA2G12AQ9BZM1 189 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 NARFLQ9H6Q4 476 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 TMEM27Q9HBJ8 222 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 ZNF275Q9NSD4 429 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-204ENST00000521331 MED29Q9NX70 200 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 MRPL39Q9NYK5 338 aaKnown RBP12.78□□□□□ -0.36
PRKDC-204ENST00000521331 SLC7A8Q9UHI5 535 aa12.78□□□□□ -0.36
PRKDC-204ENST00000521331 TRAV20A0A0B4J274 112 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 PRORSD1PA6NEY8 169 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 FAM157AC9JC47 383 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 BGLAPP02818 100 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 GAAP10253 952 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 ARAFP10398 606 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 COMPP49747 757 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-204ENST00000521331 SEC24CP53992 1094 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 AQP5P55064 265 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 WDR4P57081 412 aaKnown RBP12.77□□□□□ -0.37
PRKDC-204ENST00000521331 ACTG1P63261 375 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 CAMK2DQ13557 499 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 MAD2L1BPQ15013 274 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-204ENST00000521331 MMEL1Q495T6 779 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 GCNT6Q5T4J0 391 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 SWT1Q5T5J6 900 aaKnown RBP12.77□□□□□ -0.37
PRKDC-204ENST00000521331 REEP3Q6NUK4 255 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 NHLRC1Q6VVB1 395 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 LRP11Q86VZ4 500 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 CARM1Q86X55 608 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 BHLHE22Q8NFJ8 381 aaPredicted RBP12.77□□□□□ -0.37
PRKDC-204ENST00000521331 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 TXNDC15Q96J42 360 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 LRRC37BQ96QE4 947 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 EVA1AQ9H8M9 152 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 LPAR2Q9HBW0 351 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 TREM2Q9NZC2 230 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 ZNF224Q9NZL3 707 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 DUSP13Q9UII6 198 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 GPR160Q9UJ42 338 aa12.77□□□□□ -0.37
PRKDC-204ENST00000521331 TENM1Q9UKZ4 2725 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 A0A0B4J2E0 115 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 A0A1B0GX12 115 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 A0A1W2PPW3 197 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 PLPP3O14495 311 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 PPIHO43447 177 aaKnown RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 SPRY1O43609 319 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 SERPINA5P05154 406 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 ANPEPP15144 967 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 HOXB9P17482 250 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 PPIBP23284 216 aaKnown RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 RGS8P57771 180 aaPredicted RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 SELENOVP59797 346 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 CDK6Q00534 326 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 MYBPC1Q00872 1141 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 OR1Q1Q15612 314 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 SLC2A7Q6PXP3 512 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 USP43Q70EL4 1123 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 PIWIL3Q7Z3Z3 882 aaKnown RBP12.76□□□□□ -0.37
PRKDC-204ENST00000521331 COMTD1Q86VU5 262 aa12.76□□□□□ -0.37
PRKDC-204ENST00000521331 C10orf53Q8N6V4 93 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms