RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 TMEM182Q6ZP80 229 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 IFNEQ86WN2 208 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CCDC50Q8IVM0 306 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 OR4N5Q8IXE1 308 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 C10orf67Q8IYJ2 551 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SLC35F6Q8N357 371 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 MMGT1Q8N4V1 131 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RNF10Q8N5U6 811 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 ARFGAP2Q8N6H7 521 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 WDR31Q8NA23 367 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 PAPD5Q8NDF8 572 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 OR1J4Q8NGS1 313 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 LINC01006Q8NI28 216 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 RDH11Q8TC12 318 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TFB1MQ8WVM0 346 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 GTF3AQ92664 365 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF75CPQ92670 426 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 DAZLQ92904 295 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SLAMF9Q96A28 289 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 GMPPAQ96IJ6 420 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 ALS2CR12Q96Q35 445 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SEPHS2Q99611 448 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 TBL1YQ9BQ87 522 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 KATNB1Q9BVA0 655 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 POTEKPQ9BYX7 375 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 WNT5BQ9H1J7 359 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 FN3KRPQ9HA64 309 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 NTN4Q9HB63 628 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 FOLH1BQ9HBA9 442 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 LPAR2Q9HBW0 351 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 PNRC2Q9NPJ4 139 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 LZTFL1Q9NQ48 299 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 CYSLTR2Q9NS75 346 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 DDX28Q9NUL7 540 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 FAIMQ9NVQ4 179 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 LYARQ9NX58 379 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 ANAPC7Q9UJX3 599 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 PTBP2Q9UKA9 531 aaKnown RBP3.22□□□□□ -1.89
VPS13B-208ENST00000521037 SPACA6W5XKT8 324 aa3.22□□□□□ -1.89
VPS13B-208ENST00000521037 MYCBP2O75592 4640 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 MDFIC2A0A1B0GVS7 189 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SLC22A23A1A5C7 686 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 OR2M5A3KFT3 312 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SMIM30A4D0T7 59 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DPPA5A6NC42 116 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 K7EPI3 171 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RHODO00212 210 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 PRMT5O14744 637 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 EIF3HO15372 352 aaKnown RBP eCLIP3.21□□□□□ -1.97e-8■■■■□ 24.6
VPS13B-208ENST00000521037 PLPP2O43688 288 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 TRAF3IP2O43734 574 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 OR1F1O43749 312 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 PRKRAO75569 313 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RP2O75695 350 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SCELO95171 688 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SYF2O95926 243 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SERPINA6P08185 405 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DAOP14920 347 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 EPORP19235 508 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 IGHV1-2P23083 117 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 AHRP35869 848 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 HSD17B2P37059 387 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ACAA2P42765 397 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FABP6P51161 128 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 GEMP55040 296 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 NME5P56597 212 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 GMFBP60983 142 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 BTN3A2P78410 334 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 KLHL30Q0D2K2 578 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 PHKG1Q16816 387 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FAM153CQ494X1 144 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ANKDD1AQ495B1 522 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 AARDQ4LEZ3 155 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 RNASEH2BQ5TBB1 312 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ANKRD22Q5VYY1 191 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FRG2Q64ET8 278 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SUMO4Q6EEV6 95 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 SIGIRRQ6IA17 410 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FAHD2BQ6P2I3 314 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 CASC4Q6P4E1 433 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ZBTB49Q6ZSB9 765 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 GALNT10Q86SR1 603 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 CROCCP2Q86T23 111 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 CCDC190Q86UF4 302 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 ANKRD13BQ86YJ7 626 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 PLCZ1Q86YW0 608 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DDIASQ8IXT1 998 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 IFT20Q8IY31 132 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 PRR22Q8IZ63 422 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FBXL14Q8N1E6 418 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 MREGQ8N565 214 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 DEFB108BQ8NET1 73 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 OR5M1Q8NGP8 315 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 OR4L1Q8NH43 312 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 FBXO30Q8TB52 745 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 WDR20Q8TBZ3 569 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 AENQ8WTP8 325 aaKnown RBP3.21□□□□□ -1.9
VPS13B-208ENST00000521037 KCTD4Q8WVF5 259 aa3.21□□□□□ -1.9
VPS13B-208ENST00000521037 NEIL2Q969S2 332 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms