RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 IGKV3-15P01624 115 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 IGLV1-44P01699 117 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 APEHP13798 732 aaKnown RBP14□□□□□ -0.17
IGHV3-42-201ENST00000520410 IFNGR1P15260 489 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 PCGF2P35227 344 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 PCBP3P57721 371 aaKnown RBP14□□□□□ -0.17
IGHV3-42-201ENST00000520410 TAS2R41P59536 307 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 LSM11P83369 360 aaKnown RBP eCLIP14□□□□□ -0.17
IGHV3-42-201ENST00000520410 NPTX1Q15818 432 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 MST1LQ2TV78 715 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 TRMT5Q32P41 509 aaKnown RBP14□□□□□ -0.17
IGHV3-42-201ENST00000520410 C3orf36Q3SXR2 165 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 PODNL1Q6PEZ8 512 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 DEF8Q6ZN54 512 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 NANOGNBQ7Z5D8 188 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 CCDC36Q8IYA8 594 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 GPR32P1Q8NGA4 272 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 RASSF5Q8WWW0 418 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 SLC41A3Q96GZ6 507 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 FOXB1Q99853 325 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 BEX2Q9BXY8 128 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 TPK1Q9H3S4 243 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 ZNF385DQ9H6B1 395 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 KAT8Q9H7Z6 458 aaKnown RBP14□□□□□ -0.17
IGHV3-42-201ENST00000520410 NOX3Q9HBY0 568 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 SH3GLB1Q9Y371 365 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 SPEF1Q9Y4P9 236 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 GMEB1Q9Y692 573 aa14□□□□□ -0.17
IGHV3-42-201ENST00000520410 NIPBLQ6KC79 2804 aaeCLIP14□□□□□ -0.17
IGHV3-42-201ENST00000520410 CADP27708 2225 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 MCIDASD6RGH6 385 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 MRASO14807 208 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 FMO6PO60774 539 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 C8BP07358 591 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 ARFIP2P53365 341 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 VLDLRP98155 873 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 VMACQ2NL98 169 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 LRRC23Q53EV4 343 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 RABL3Q5HYI8 236 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 SLC35D2Q76EJ3 337 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 PXKQ7Z7A4 578 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 HIPK1Q86Z02 1210 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 NUP37Q8NFH4 326 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 TAMM41Q96BW9 452 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 SH3GL1Q99961 368 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 SHARPINQ9H0F6 387 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 RNF121Q9H920 327 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 KCNS2Q9ULS6 477 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 CMAHPQ9Y471 501 aa13.99□□□□□ -0.17
IGHV3-42-201ENST00000520410 LOC102725191A0A1B0GVB3 256 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 RNF212BA8MTL3 300 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 BLOC1S5-TXNDC5H3BN57 136 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 NDUFS8O00217 210 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 SHOX2O60902 331 aaPredicted RBP13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 UBL3O95164 117 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 IGHV4-31P0DP07 118 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 TNFRSF1BP20333 461 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 GIPRP48546 466 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 GZMKP49863 264 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 PPOXP50336 477 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 CLRN1P58418 232 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 HGFACQ04756 655 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 MAPRE2Q15555 327 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 EFNB3Q15768 340 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 ZNF74Q16587 644 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 METTL21CQ5VZV1 264 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 REP15Q6BDI9 236 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 WDR88Q6ZMY6 472 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 CARM1Q86X55 608 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 ZCCHC24Q8N2G6 241 aaKnown RBP13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 FAM169BQ8N8A8 192 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 IL17RDQ8NFM7 739 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 OR4D11Q8NGI4 311 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 TSPEARQ8WU66 669 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 STON2Q8WXE9 905 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 ZNF566Q969W8 418 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 LRR1Q96L50 414 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 FOXN4Q96NZ1 517 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 ZNF442Q9H7R0 627 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 NAV3Q8IVL0 2385 aa13.98□□□□□ -0.17
IGHV3-42-201ENST00000520410 LOC100289279A0A1B0GTE1 492 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 LOC390937A0A1W2PQ73 354 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 FZD7O75084 574 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 FARS2O95363 451 aaKnown RBP13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 ADRA2AP08913 450 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 DAOP14920 347 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 NR4A2P43354 598 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 RAB1AP62820 205 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 FAM166AQ6J272 317 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 NANOGP8Q6NSW7 305 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 IL17RELQ6ZVW7 336 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 CXXC5Q7LFL8 322 aaKnown RBP13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 CDK20Q8IZL9 346 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 TPD52L3Q96J77 140 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 MPP4Q96JB8 637 aa13.97□□□□□ -0.17
IGHV3-42-201ENST00000520410 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms