RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 IGHG4P01861 327 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 IGKV5-2P06315 115 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 PLEKP08567 350 aaPredicted RBP5.71□□□□□ -1.5
LSM1-202ENST00000520286 ZNF735P0CB33 412 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 PABPC4LP0CB38 370 aaKnown RBP5.71□□□□□ -1.5
LSM1-202ENST00000520286 FOLR2P14207 255 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 PGAM2P15259 253 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 CASP1P29466 404 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 IL2RGP31785 369 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 YWHABP31946 246 aaKnown RBP5.71□□□□□ -1.5
LSM1-202ENST00000520286 MAGEA1P43355 309 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 RPL29P47914 159 aaKnown RBP5.71□□□□□ -1.5
LSM1-202ENST00000520286 STARP49675 285 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 RPL32P62910 135 aaKnown RBP5.71□□□□□ -1.5
LSM1-202ENST00000520286 HPCAP84074 193 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 KLRB1Q12918 225 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 CGB2Q6NT52 195 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 NELFCDQ8IXH7 590 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 KIF2BQ8N4N8 673 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 OR9K2Q8NGE7 335 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 FAM122AQ96E09 287 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 OLFM3Q96PB7 478 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 OR5M11Q96RB7 305 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 RANBP9Q96S59 729 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 ZNF670Q9BS34 389 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 DPH7Q9BTV6 452 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 CHRDL1Q9BU40 450 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 SMYD3Q9H7B4 428 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 NUDT15Q9NV35 164 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 SPATA7Q9P0W8 599 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 ZNF639Q9UID6 485 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 IFT52Q9Y366 437 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 TMED5Q9Y3A6 229 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 SSC5DA1L4H1 1573 aa5.71□□□□□ -1.5
LSM1-202ENST00000520286 E7ESA3 106 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 RGS16O15492 202 aaPredicted RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 PRKAB2O43741 272 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 CXCL13O43927 109 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 OR10H3O60404 316 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 CABYRO75952 493 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 AP2A1O95782 977 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 ADORA2BP29275 332 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 FGF9P31371 208 aaPredicted RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 PPP1R2P41236 205 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 SERPINB8P50452 374 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 DAP3P51398 398 aaKnown RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 DUSP3P51452 185 aaPredicted RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 PSMD7P51665 324 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 SUCLG1P53597 346 aaKnown RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 VGLL4Q14135 290 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 LIN52Q52LA3 116 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 C3orf62Q6ZUJ4 267 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 NCCRP1Q6ZVX7 275 aaPredicted RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 TGIF2LXQ8IUE1 241 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 CATSPER1Q8NEC5 780 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 TRPV1Q8NER1 839 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 TCTEX1D2Q8WW35 142 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 MRPS31Q92665 395 aaKnown RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 TIMD4Q96H15 378 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 CATSPER2Q96P56 530 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 IL4I1Q96RQ9 567 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 CDX2Q99626 313 aaPredicted RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 MCHR1Q99705 422 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 APOL2Q9BQE5 337 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 GPR61Q9BZJ8 451 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 STMN4Q9H169 189 aaPredicted RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 LY9Q9HBG7 655 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 WARS2Q9UGM6 360 aaKnown RBP5.7□□□□□ -1.5
LSM1-202ENST00000520286 ERVW-1Q9UQF0 538 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 STK38LQ9Y2H1 464 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 NPTNQ9Y639 398 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 CEP290O15078 2479 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 A0A1B0GUL6 1792 aa5.7□□□□□ -1.5
LSM1-202ENST00000520286 HCFC1P51610 2035 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 SMIM31A0A1B0GVY4 71 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 K7ENP7 123 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 PGRMC1O00264 195 aaKnown RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 GPAA1O43292 621 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 RAMP3O60896 148 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 ATP5LO75964 103 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 DUSP14O95147 198 aaKnown RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 DEXIO95424 95 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 CLDN9O95484 217 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 TBX6O95947 436 aaPredicted RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 CCNE1P24864 410 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 GNA11P29992 359 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 NMT1P30419 496 aaKnown RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 CCR1P32246 355 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 UGT1A5P35504 534 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 MAP3K8P41279 467 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 KLK7P49862 253 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 HLCSP50747 726 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 RPL26P61254 145 aaKnown RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 TGIF1Q15583 401 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 ALX1Q15699 326 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 BCL2A1Q16548 175 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 QRICH1Q2TAL8 776 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 DUPD1Q68J44 220 aa5.69□□□□□ -1.5
LSM1-202ENST00000520286 CCDC137Q6PK04 289 aaKnown RBP5.69□□□□□ -1.5
LSM1-202ENST00000520286 UQCC3Q6UW78 93 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms