RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 UNQ6494/PRO21346Q6UXR6 183 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 LINC00299Q6ZSB3 139 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 GALNTL5Q7Z4T8 443 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 ATP6V1C2Q8NEY4 427 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 OR6S1Q8NH40 331 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 TMEM203Q969S6 136 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 NTNG2Q96CW9 530 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 NDEL1Q9GZM8 345 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 PLGRKTQ9HBL7 147 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 GRHPRQ9UBQ7 328 aa13.02□□□□□ -0.33
CLN8-204ENST00000519254 BOKQ9UMX3 212 aaPredicted RBP13.02□□□□□ -0.33
CLN8-204ENST00000519254 MED12Q93074 2177 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 A0A1W2PQL4 384 aaPredicted RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 METTL15A6NJ78 407 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 C11orf98E9PRG8 122 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 PLPP3O14495 311 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 AKAP8O43823 692 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 OR2T1O43869 369 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 NME2P1O60361 137 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 RFPL3SP0C7P2 107 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 IL11P20809 199 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 NME2P22392 152 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 TNFSF10P50591 281 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 SLC25A1P53007 311 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 HCCSP53701 268 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 LGALS3BPQ08380 585 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 KRR1Q13601 381 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 MESTQ5EB52 335 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 LINC01590Q5TEZ4 76 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 SLC6A19Q695T7 634 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 GPR139Q6DWJ6 353 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 JAZF1Q86VZ6 243 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 KLBQ86Z14 1044 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 POMGNT2Q8NAT1 580 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 ZCCHC14Q8WYQ9 949 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 ARL5BQ96KC2 179 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 CDADC1Q9BWV3 514 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 ZFP64Q9NPA5 681 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 RPRD1BQ9NQG5 326 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 TXNL4BQ9NX01 149 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 CCDC59Q9P031 241 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 ZNF346Q9UL40 294 aaKnown RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 SSR3Q9UNL2 185 aa13.01□□□□□ -0.33
CLN8-204ENST00000519254 KLF13Q9Y2Y9 288 aaPredicted RBP13.01□□□□□ -0.33
CLN8-204ENST00000519254 ZNF208O43345 1280 aa13□□□□□ -0.33
CLN8-204ENST00000519254 CBR3O75828 277 aa13□□□□□ -0.33
CLN8-204ENST00000519254 GDF1P27539 372 aa13□□□□□ -0.33
CLN8-204ENST00000519254 CD97P48960 835 aa13□□□□□ -0.33
CLN8-204ENST00000519254 DSCR4P56555 118 aaPredicted RBP13□□□□□ -0.33
CLN8-204ENST00000519254 CXADRP78310 365 aa13□□□□□ -0.33
CLN8-204ENST00000519254 BDH1Q02338 343 aa13□□□□□ -0.33
CLN8-204ENST00000519254 VASNQ6EMK4 673 aa13□□□□□ -0.33
CLN8-204ENST00000519254 SSX6Q7RTT6 188 aa13□□□□□ -0.33
CLN8-204ENST00000519254 RFLNBQ8N5W9 214 aa13□□□□□ -0.33
CLN8-204ENST00000519254 MCFD2Q8NI22 146 aa13□□□□□ -0.33
CLN8-204ENST00000519254 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
CLN8-204ENST00000519254 MRGPRX4Q96LA9 322 aa13□□□□□ -0.33
CLN8-204ENST00000519254 TSSK2Q96PF2 358 aa13□□□□□ -0.33
CLN8-204ENST00000519254 ZNF587Q96SQ5 575 aaPredicted RBP13□□□□□ -0.33
CLN8-204ENST00000519254 CNN2Q99439 309 aaKnown RBP13□□□□□ -0.33
CLN8-204ENST00000519254 SMAD5Q99717 465 aaKnown RBP13□□□□□ -0.33
CLN8-204ENST00000519254 TM9SF2Q99805 663 aa13□□□□□ -0.33
CLN8-204ENST00000519254 NXF2Q9GZY0 626 aaKnown RBP13□□□□□ -0.33
CLN8-204ENST00000519254 TMEM185BQ9H7F4 350 aa13□□□□□ -0.33
CLN8-204ENST00000519254 INIPQ9NRY2 104 aa13□□□□□ -0.33
CLN8-204ENST00000519254 BABAM2Q9NXR7 383 aa13□□□□□ -0.33
CLN8-204ENST00000519254 MRPL39Q9NYK5 338 aaKnown RBP13□□□□□ -0.33
CLN8-204ENST00000519254 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
CLN8-204ENST00000519254 SIRT4Q9Y6E7 314 aaPredicted RBP13□□□□□ -0.33
CLN8-204ENST00000519254 ACACAQ13085 2346 aa13□□□□□ -0.33
CLN8-204ENST00000519254 URB1O60287 2271 aaKnown RBP12.99□□□□□ -0.33
CLN8-204ENST00000519254 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 DCTN6O00399 190 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 TRAPPC6AO75865 159 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 GLCEO94923 617 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 CELP19835 753 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 GABRA5P31644 462 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 PYCR1P32322 319 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 IDUAP35475 653 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 NAA10P41227 235 aaPredicted RBP12.99□□□□□ -0.33
CLN8-204ENST00000519254 MEOX1P50221 254 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 UCNP55089 124 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 ACTC1P68032 377 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 ACTA1P68133 377 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 PLGLB1Q02325 96 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.99□□□□□ -0.33
CLN8-204ENST00000519254 ZNF829Q3KNS6 432 aaPredicted RBP12.99□□□□□ -0.33
CLN8-204ENST00000519254 ZNF404Q494X3 552 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 RAET1LQ5VY80 246 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 CD200R1LQ6Q8B3 271 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 LYPD4Q6UWN0 246 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 MFSD8Q8NHS3 518 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 ALG12Q9BV10 488 aa12.99□□□□□ -0.33
CLN8-204ENST00000519254 AKIP1Q9NQ31 210 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms