RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 HLA-DQB2P05538 268 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 APRTP07741 180 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 ERCC1P07992 297 aaPredicted RBP6.5□□□□□ -1.37
CLK4-202ENST00000519132 MPLP40238 635 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 CSNK1G2P78368 415 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 PRPSAP1Q14558 356 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 ANKRD22Q5VYY1 191 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 CENPUQ71F23 418 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 ZNF367Q7RTV3 350 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 SLC16A13Q7RTY0 426 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 THOC6Q86W42 341 aaKnown RBP6.5□□□□□ -1.37
CLK4-202ENST00000519132 OR13J1Q8NGT2 312 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 WFDC5Q8TCV5 224 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 IMP4Q96G21 291 aaKnown RBP6.5□□□□□ -1.37
CLK4-202ENST00000519132 BTBD10Q9BSF8 475 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 ILKAPQ9H0C8 392 aaPredicted RBP6.5□□□□□ -1.37
CLK4-202ENST00000519132 LINC00597Q9H2U6 94 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 RGCCQ9H4X1 137 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 B3GAT1Q9P2W7 334 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 EPHA6Q9UF33 1036 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 CA5BQ9Y2D0 317 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 NSG2Q9Y328 171 aa6.5□□□□□ -1.37
CLK4-202ENST00000519132 TRBV2A0A0J9YWF9 115 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 SCO2A0A1W2PP80 73 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 SMLR1H3BR10 107 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 CHP2O43745 196 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 OR10H3O60404 316 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 CD160O95971 181 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 ATP6V1B2P21281 511 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 UCP1P25874 307 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 HERVK_113P63132 956 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 TNFRSF9Q07011 255 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 USF2Q15853 346 aaPredicted RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 KCTD19Q17RG1 926 aaPredicted RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 LY6G5CQ5SRR4 150 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 MEX3DQ86XN8 651 aaKnown RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 COMMD1Q8N668 190 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 BHLHE22Q8NFJ8 381 aaPredicted RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 KXD1Q9BQD3 176 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 ACTL8Q9H568 366 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 POMKQ9H5K3 350 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 MSL2Q9HCI7 577 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 RAPGEFL1Q9UHV5 662 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 ZNF221Q9UK13 617 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 POFUT2Q9Y2G5 429 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 POLR3HQ9Y535 204 aaPredicted RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 U3KQV3 271 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 MYLKQ15746 1914 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 TICRRQ7Z2Z1 1910 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 CENPXA8MT69 81 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 ANHXE9PGG2 379 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 CYR61O00622 381 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 STX7O15400 261 aaKnown RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 GRID2O43424 1007 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 RAF1P04049 648 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 MUC1P15941 1255 aaPredicted RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 SPI1P17947 270 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 PSMC3P17980 439 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 GEMP55040 296 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 HNF4GQ14541 408 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 ZBED5Q49AG3 693 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 FRMPD2BQ6IN97 320 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 SVOPLQ8N434 492 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 SLC38A9Q8NBW4 561 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 STXBP6Q8NFX7 210 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 OR52I2Q8NH67 350 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 SPPL2AQ8TCT8 520 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 SMPDL3BQ92485 455 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 CMTM5Q96DZ9 223 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 TEAD3Q99594 435 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 C7orf50Q9BRJ6 194 aaKnown RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 CLEC4EQ9ULY5 219 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 FOXA2Q9Y261 457 aaPredicted RBP6.49□□□□□ -1.37
CLK4-202ENST00000519132 HS3ST2Q9Y278 367 aa6.49□□□□□ -1.37
CLK4-202ENST00000519132 ISPDA4D126 451 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 HELTA6NFD8 242 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 RGS5O15539 181 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 ENTPD5O75356 428 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 IFNA10P01566 189 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CBLP22681 906 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 LMO1P25800 156 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CD70P32970 193 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 RGS8P57771 180 aaPredicted RBP6.48□□□□□ -1.37
CLK4-202ENST00000519132 ZNF235Q14590 738 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 TPRG1Q6ZUI0 275 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 C5orf24Q7Z6I8 188 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 PGBD5Q8N414 524 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 OR2V1Q8NHB1 315 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 PROKR1Q8TCW9 393 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 FCGR1BQ92637 280 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 RAB1CQ92928 201 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 OXNAD1Q96HP4 312 aaPredicted RBP6.48□□□□□ -1.37
CLK4-202ENST00000519132 FOXN4Q96NZ1 517 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 HBEGFQ99075 208 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CHRAC1Q9NRG0 131 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 NLGN3Q9NZ94 848 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 TCAF1Q9Y4C2 921 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms