RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ZIM3Q96PE6 472 aa9.66□□□□□ -0.86
CTNNA1-205ENST00000517904 RHOXF2Q9BQY4 288 aa9.66□□□□□ -0.86
CTNNA1-205ENST00000517904 HINT3Q9NQE9 182 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-205ENST00000517904 SLC6A13Q9NSD5 602 aa9.66□□□□□ -0.86
CTNNA1-205ENST00000517904 TAAR3PQ9P1P4 343 aa9.66□□□□□ -0.86
CTNNA1-205ENST00000517904 SLC7A8Q9UHI5 535 aa9.66□□□□□ -0.86
CTNNA1-205ENST00000517904 NBEAL2Q6ZNJ1 2754 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 IGKV1D-42A0A075B6H8 117 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 IGLV3-9A0A075B6K5 115 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 IGHV1-69-2A0A0G2JMI3 117 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 MS4A18H0YCH9 400 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 AKAP8O43823 692 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 ZNF500O60304 480 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 BCHEP06276 602 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 BPGMP07738 259 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 NUDT7P0C024 238 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 NUDT17P0C025 328 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 FAM157BP0CG42 384 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 CBLP22681 906 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 GATA3P23771 443 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 IL12AP29459 219 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 CLNS1AP54105 237 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 NME5P56597 212 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 ERVS71-1P61550 626 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 UFM1P61960 85 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 MS4A18Q3C1V0 323 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 FAM69AQ5T7M9 428 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 RGS7BPQ6MZT1 257 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 C6orf89Q6UWU4 347 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 NHLRC1Q6VVB1 395 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 H1FNTQ75WM6 255 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 ZNF771Q7L3S4 317 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 DOK3Q7L591 496 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 SLC38A5Q8WUX1 472 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 GTF3AQ92664 365 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 ANP32BQ92688 251 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 TXNDC15Q96J42 360 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 LRR1Q96L50 414 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 FOXB1Q99853 325 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 SPATA9Q9BWV2 254 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 DENND2DQ9H6A0 471 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 MED29Q9NX70 200 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 P2RX2Q9UBL9 471 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 POFUT2Q9Y2G5 429 aa9.65□□□□□ -0.86
CTNNA1-205ENST00000517904 TLDC2A0PJX2 215 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 CLDN25C9JDP6 229 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 OR2T1O43869 369 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 UBL3O95164 117 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 SERPINA5P05154 406 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ALDOCP09972 364 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 CCL2P13500 99 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ETFAP13804 333 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ZNF250P15622 560 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 RAD52P43351 418 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 CRISP3P54108 245 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 KLF3P57682 345 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 LCN2P80188 198 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 LARS2Q15031 903 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 PCGF3Q3KNV8 242 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 MMEL1Q495T6 779 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 TMEM154Q6P9G4 183 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 RBMS3Q6XE24 437 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 USP51Q70EK9 711 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 UEVLDQ8IX04 471 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 BCL6BQ8N143 479 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ADPRHL1Q8NDY3 354 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 DEFB108BQ8NET1 73 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 SLC41A3Q96GZ6 507 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 TMEM19Q96HH6 336 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ZNF48Q96MX3 618 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 RSPO3Q9BXY4 272 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ULBP2Q9BZM5 246 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 C20orf27Q9GZN8 174 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 OR51B6Q9H340 312 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 NKIRAS2Q9NYR9 191 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 KLHL14Q9P2G3 628 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 ZNF69Q9UC07 566 aa9.64□□□□□ -0.87
CTNNA1-205ENST00000517904 A0A087WUJ7 227 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 RNASE1P07998 156 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 HTR2AP28223 471 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 LSP1P33241 339 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 ETV4P43268 484 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 HNRNPA0Q13151 305 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 CAMK2DQ13557 499 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 KLF17Q5JT82 389 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 OR6N1Q8NGY5 312 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 SYNPRQ8TBG9 265 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 SNX33Q8WV41 574 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 SLC38A4Q969I6 547 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 PKNOX2Q96KN3 472 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 OR52E6Q96RD3 313 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 GAL3ST1Q99999 423 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 NUF2Q9BZD4 464 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 B3GAT2Q9NPZ5 323 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 CALML5Q9NZT1 146 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 FBXL3Q9UKT7 428 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 RYR3Q15413 4870 aa9.63□□□□□ -0.87
CTNNA1-205ENST00000517904 TRAV36DV7A0A075B6V5 113 aa9.62□□□□□ -0.87
CTNNA1-205ENST00000517904 A0A1B0GWA3 101 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms