RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PELI1Q96FA3 418 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 PBDC1Q9BVG4 233 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 RPS10P5Q9NQ39 176 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SMCO4Q9NRQ5 59 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 MED9Q9NWA0 146 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HCFC1R1Q9NWW0 138 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 CXXC1Q9P0U4 656 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HHLA2Q9UM44 414 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 NPIPA1Q9UND3 350 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SIGLEC7Q9Y286 467 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 NYNRINQ9P2P1 1898 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF878C9JN71 531 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 MAGEB4O15481 346 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 OGG1O15527 345 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 GLSO94925 669 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 TSPAN15O95858 294 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 LIPCP11150 499 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 NR0B1P51843 470 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 CST6Q15828 149 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SLC36A2Q495M3 483 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 ABCA11PQ4W5N1 156 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 PAN3Q58A45 887 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SFRP5Q5T4F7 317 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 LIPNQ5VXI9 398 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 CD163Q86VB7 1156 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 STX12Q86Y82 276 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 EDAQ92838 391 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 WDR89Q96FK6 387 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 URM1Q9BTM9 101 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 EIF5A2Q9GZV4 153 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HRH4Q9H3N8 390 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 ELOVL3Q9HB03 270 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 PRSS47A8MTI9 375 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 PEX12O00623 359 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ADRA2AP08913 450 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR4E1P0C645 316 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CLUP10909 449 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 AMY2BP19961 511 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HSD11B1P28845 292 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 IGFALSP35858 605 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 SCAND1P57086 179 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 UBE2MP61081 183 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 LSM11P83369 360 aaKnown RBP eCLIP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 GUCA2AQ02747 115 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 UBXN2BQ14CS0 331 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 NNATQ16517 81 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 WBP2NLQ6ICG8 309 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 FAM180AQ6UWF9 173 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 WDR88Q6ZMY6 472 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 MRGPREQ86SM8 312 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 TMEM200AQ86VY9 491 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 RASGRP3Q8IV61 690 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 DND1Q8IYX4 353 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF511Q8NB15 262 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR5M9Q8NGP3 310 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR6K3Q8NGY3 331 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ADAMTS18Q8TE60 1221 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CCDC86Q9H6F5 360 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 MYO10Q9HD67 2058 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 MYO16Q9Y6X6 1858 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 A0A1W2PP55 124 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 A0A1W2PQU0 124 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 EFCAB7A8K855 629 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 H7C417 338 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 M0QYG6 137 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CDC42EP2O14613 210 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 MPC2O95563 127 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CTSLP07711 333 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CD14P08571 375 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 C5AR1P21730 350 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF85Q03923 595 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 PDZK1IP1Q13113 114 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 COL19A1Q14993 1142 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZC3H14Q6PJT7 736 aaKnown RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 UNQ6126/PRO20091Q6UXV3 157 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR4K17Q8NGC6 315 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR6N1Q8NGY5 312 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR14A16Q8NHC5 309 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 PHYHIPLQ96FC7 376 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 SLC25A44Q96H78 314 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 MTFP1Q9UDX5 166 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ZSWIM8A7E2V4 1837 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 BHLHE40O14503 412 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CFDP00746 253 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 S100A8P05109 93 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HCKP08631 526 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 NMBP08949 121 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 ACHEP22303 614 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CBX5P45973 191 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 CEBPGP53567 150 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 TMEM244Q5VVB8 128 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 YOD1Q5VVQ6 348 aaPredicted RBP6.11□□□□□ -1.43
CPNE3-203ENST00000517490 AWAT2Q6E213 333 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 NHLRC1Q6VVB1 395 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 BPIFCQ8NFQ6 507 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 OR5H2Q8NGV7 314 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 PFDN5Q99471 154 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 FAM83CQ9BQN1 747 aa6.11□□□□□ -1.43
CPNE3-203ENST00000517490 HDAC8Q9BY41 377 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms