RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 LSM7Q9UK45 103 aaKnown RBP2.41□□□□□ -2.02
RNU6-840P-201ENST00000517275 CDH10Q9Y6N8 788 aa2.41□□□□□ -2.02
RNU6-840P-201ENST00000517275 LRRIQ3A6PVS8 624 aaPredicted RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 GABRR3A8MPY1 467 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 C12orf71A8MTZ7 269 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 EIF3GO75821 320 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 SERPINE2P07093 398 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 DCNP07585 359 aaKnown RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CCDC166P0CW27 439 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 PRKACAP17612 351 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 PSMB1P20618 241 aaKnown RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 DCKP27707 260 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CD1BP29016 333 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 GSSP48637 474 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CX3CR1P49238 355 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC11A1P49279 550 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 SUB1P53999 127 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 IRX3P78415 501 aaPredicted RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 ADARB1P78563 741 aaKnown RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF92Q03936 586 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 ACVR1Q04771 509 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 SELENBP1Q13228 472 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 STUMQ69YW2 141 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CTRB2Q6GPI1 263 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 TMIGD1Q6UXZ0 262 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 Q6ZN92 141 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 GPD1LQ8N335 351 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 C14orf178Q8N769 122 aaPredicted RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 RHEBL1Q8TAI7 183 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 DTX3LQ8TDB6 740 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CCDC126Q96EE4 140 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 FCRL1Q96LA6 429 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 GSDMAQ96QA5 445 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 ATP5SQ99766 215 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 PELOQ9BRX2 385 aaKnown RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 NICN1Q9BSH3 213 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 ACTR6Q9GZN1 396 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 IL22Q9GZX6 179 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CWH43Q9H720 699 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC25A22Q9H936 323 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 PLGRKTQ9HBL7 147 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 FGF20Q9NP95 211 aaPredicted RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 TNFRSF19Q9NS68 423 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 AIG1Q9NVV5 245 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 HOXC10Q9NYD6 342 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 CALYQ9NYX4 217 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 PDP1Q9P0J1 537 aaPredicted RBP2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 MMP17Q9ULZ9 603 aa2.4□□□□□ -2.03
RNU6-840P-201ENST00000517275 COL22A1Q8NFW1 1626 aaPredicted RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 TRAV39A0A0B4J263 110 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 A0A0B4J2A0 478 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SMCO2A6NFE2 343 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZFP92A6NM28 416 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SUPT3HB4E1H0 165 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SCAMP2O15127 329 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC31A2O15432 143 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 AKR7A2O43488 359 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 EIF4E2O60573 245 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 HUS1O60921 280 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SRSF10O75494 262 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 AQP8O94778 261 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ERLIN2O94905 339 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 FGFR1OPO95684 399 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CRYGCP07315 174 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CT45A6P0DMU7 189 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CT45A5P0DMU8 189 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CT45A7P0DMV0 189 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 AK4P27144 223 aaPredicted RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 RDXP35241 583 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR1G1P47890 313 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 RFX3P48380 749 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 DIO3P55073 304 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 TAS2R19P59542 299 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 RAB11AP62491 216 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CSNK1G2P78368 415 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ILKQ13418 452 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 NCF4Q15080 339 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 RAB11BQ15907 218 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 MRPL23Q16540 153 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CCDC14Q49A88 953 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CT45A1Q5HYN5 189 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC25A30Q5SVS4 291 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 C9orf129Q5T035 196 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 PLCXD3Q63HM9 321 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SCARA5Q6ZMJ2 495 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF836Q6ZNA1 936 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ASCL5Q7RTU5 278 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 MMAAQ8IVH4 418 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 FBXO16Q8IX29 292 aaPredicted RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ZNF100Q8IYN0 542 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR9G4Q8NGQ1 327 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR10R2Q8NGX6 335 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 OR2G2Q8NGZ5 317 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 CT45A3Q8NHU0 189 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 ANKRD49Q8WVL7 239 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 DUS3LQ96G46 650 aaKnown RBP2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SLC35E1Q96K37 410 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 OPALINQ96PE5 141 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 SH3GL3Q99963 347 aa2.39□□□□□ -2.03
RNU6-840P-201ENST00000517275 NRIP2Q9BQI9 281 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms