RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 KISS1RQ969F8 398 aaPredicted RBP4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 STARD4Q96DR4 205 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 MUCL1Q96DR8 90 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 SLC25A44Q96H78 314 aaPredicted RBP4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 USB1Q9BQ65 265 aaKnown RBP4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 EMC6Q9BV81 110 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 OPN3Q9H1Y3 402 aaPredicted RBP4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 EGLN3Q9H6Z9 239 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 NGBQ9NPG2 151 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 PLSCR4Q9NRQ2 329 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 IMPAD1Q9NX62 359 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 MED29Q9NX70 200 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 GALNT8Q9NY28 637 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 VNN3Q9NY84 501 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 TAS2R5Q9NYW4 299 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 SEC14L4Q9UDX3 406 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 IL20RAQ9UHF4 553 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 KLHL21Q9UJP4 597 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 ZNF346Q9UL40 294 aaKnown RBP4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 SIGLEC7Q9Y286 467 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 RRP15Q9Y3B9 282 aaKnown RBP4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 IER3IP1Q9Y5U9 82 aa4.84□□□□□ -1.63
SCARNA16.4-201ENST00000516956 NCKAP5O14513 1909 aa4.84□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ATMQ13315 3056 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TEX13CA0A0J9YWL9 993 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NKX2-6A6NCS4 301 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NPIPB13A6NJU9 1138 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CENPBD1B2RD01 187 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KDM4EB2RXH2 506 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ZNF814B7Z6K7 855 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NPIPB4C9JG80 1138 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PRSS44E7EML9 344 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PRR23D1E9PI22 279 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 C16orf97H3BN30 126 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 H3BNX3 289 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PDLIM1O00151 329 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 EI24O14681 340 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TRAF3IP2O43734 574 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 AHCYL1O43865 530 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KALRNO60229 2985 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 RAMP1O60894 148 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PTP4A3O75365 173 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KHDRBS3O75525 346 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TOXO94900 526 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 WNT11O96014 354 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 HPRP00739 348 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 IGHV3-9P01782 118 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 HLA-DQA2P01906 255 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 QDPRP09417 244 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PRR23D2P0DMB1 279 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 HLA-DOBP13765 273 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 APEHP13798 732 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PPP3CBP16298 524 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KLK2P20151 261 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MPGP29372 298 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CRABP1P29762 137 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SDHAP31040 664 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 GRK5P34947 590 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CD79BP40259 229 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SELENOPP49908 381 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CRISP1P54107 249 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SH3BGRP55822 239 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 CDC42P60953 191 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 LSM11P83369 360 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ADORA2A-AS1P86434 159 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ROR2Q01974 943 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 GINS1Q14691 196 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 STK11Q15831 433 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SNAPC1Q16533 368 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 LRRC36Q1X8D7 754 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ZIK1Q3SY52 487 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SLC36A3Q495N2 470 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 THEM4Q5T1C6 240 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SLC35F1Q5T1Q4 408 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 C9orf135Q5VTT2 229 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR7E24Q6IFN5 339 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 LEG1Q6P5S2 330 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 KLHL17Q6TDP4 642 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ZNF620Q6ZNG0 422 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 Q6ZT83 130 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SEM1Q6ZVN7 128 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 SSX8Q7RTT4 187 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TMEM179BQ7Z7N9 219 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 EPHX4Q8IUS5 362 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 HS3ST5Q8IZT8 346 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 GALNT4Q8N4A0 578 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 MARVELD2Q8N4S9 558 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 PACRGLQ8N7B6 248 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NAXEQ8NCW5 288 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR52E2Q8NGJ4 325 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR4K13Q8NH42 304 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ASB10Q8WXI3 467 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 NANOS1Q8WY41 292 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 RNASE6Q93091 150 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 TXNDC15Q96J42 360 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 LRR1Q96L50 414 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 Q96M85 177 aa4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 ZNF385AQ96PM9 386 aaKnown RBP4.83□□□□□ -1.64
SCARNA16.4-201ENST00000516956 OR2M2Q96R28 347 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms