RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 TIGD4Q8IY51 512 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 ARMC10Q8N2F6 343 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 PARP16Q8N5Y8 322 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 NEIL3Q8TAT5 605 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 THAP4Q8WY91 577 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 POTEKPQ9BYX7 375 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 CCDC86Q9H6F5 360 aaKnown RBP13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 FARSAQ9Y285 508 aaKnown RBP13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 GBX2P52951 348 aaPredicted RBP13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 SPEM2Q0P670 501 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 TRAM1Q15629 374 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 AGAP7PQ5VUJ5 663 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 SCAIQ8N9R8 606 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 SUMF1Q8NBK3 374 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 MRPL48Q96GC5 212 aaKnown RBP13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 PGLYRP3Q96LB9 341 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 SNX18Q96RF0 628 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 KCNN2Q9H2S1 579 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 FOXJ2Q9P0K8 574 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 GNG8Q9UK08 70 aa13.91□□□□□ -0.18
THUMPD3-210ENST00000515662 CCDC187A0A096LP49 1063 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 SHISA3A0PJX4 238 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 SMIM30A4D0T7 59 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 PRSS37A4D1T9 235 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 MS4A18H0YCH9 400 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 CASKO14936 926 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 OGG1O15527 345 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 TRIM3O75382 744 aaPredicted RBP13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 TFPIP10646 304 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 F8A1P23610 371 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 ZP4Q12836 540 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 SSPNQ14714 243 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 MS4A18Q3C1V0 323 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 H1FNTQ75WM6 255 aaPredicted RBP13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 UTS2BQ765I0 119 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 OR4K17Q8NGC6 315 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 LIPT2A6NK58 231 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 H3BML4 177 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 UPK1BO75841 260 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 TNFSF8P32971 234 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 TPTEP56180 551 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 PUDPQ08623 228 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 SPANXN2Q5MJ10 180 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 ZNF684Q5T5D7 378 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 DND1Q8IYX4 353 aaKnown RBP13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 KDM8Q8N371 416 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 NLGN4YQ8NFZ3 816 aaPredicted RBP13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 ABHD4Q8TB40 342 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 GHSRQ92847 366 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 NTNG2Q96CW9 530 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 ANGPTL4Q9BY76 406 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 SH2D2AQ9NP31 389 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 ACOXLQ9NUZ1 547 aa13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 VSX1Q9NZR4 365 aaPredicted RBP13.9□□□□□ -0.18
THUMPD3-210ENST00000515662 A0A1W2PRG6 482 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 TVP23AA6NH52 213 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PRR32B1ATL7 298 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 FAM47E-STBD1D6RA91 191 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 RGS5O15539 181 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CCL3P10147 92 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 ICAM2P13598 275 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 HLA-DOBP13765 273 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 TCEA1P23193 301 aaKnown RBP13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CAV3P56539 151 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 SIRPAP78324 504 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 FOXK1P85037 733 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 Q0VFX4 171 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CDK5R1Q15078 307 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 GLYR1Q49A26 553 aaPredicted RBP13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 DHRS13Q6UX07 377 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CDC20BQ86Y33 519 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PLCZ1Q86YW0 608 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 POC5Q8NA72 575 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PTGES2Q9H7Z7 377 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CHST11Q9NPF2 352 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 SERINC1Q9NRX5 453 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 KLHDC2Q9Y2U9 406 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PCDHGA1Q9Y5H4 931 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 HPP00738 406 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 RPS15P62841 145 aaKnown RBP13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 EIF3IQ13347 325 aaKnown RBP13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 TMEM156Q8N614 296 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 ZNF248Q8NDW4 579 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 OR5M1Q8NGP8 315 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PAQR8Q8TEZ7 354 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 SMIM19Q96E16 107 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 WDFY2Q96P53 400 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 SLC30A2Q9BRI3 323 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PPIL3Q9H2H8 161 aaKnown RBP13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 MARCH7Q9H992 704 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 PROK2Q9HC23 129 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 ALKBH4Q9NXW9 302 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 B9D1Q9UPM9 204 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 CMAHPQ9Y471 501 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
THUMPD3-210ENST00000515662 SSX4O60224 188 aa13.88□□□□□ -0.19
THUMPD3-210ENST00000515662 FZD7O75084 574 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms