RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SH3GL1Q99961 368 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 PRSS27Q9BQR3 290 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 ULBP2Q9BZM5 246 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 POLR2J2Q9GZM3 115 aaKnown RBP9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 POLR2J3Q9H1A7 115 aaKnown RBP9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 PLK3Q9H4B4 646 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 CCDC134Q9H6E4 229 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF442Q9H7R0 627 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 NOX3Q9HBY0 568 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 B3GAT2Q9NPZ5 323 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 SAR1AQ9NR31 198 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 B3GNT2Q9NY97 397 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 TAS2R5Q9NYW4 299 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF224Q9NZL3 707 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF229Q9UJW7 825 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 ADAM21Q9UKJ8 722 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 FKBP7Q9Y680 259 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 ABCA2Q9BZC7 2435 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 CR1P17927 2039 aa9.07□□□□□ -0.96
HMGXB3-205ENST00000514469 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 FAM220BPB1ANY3 271 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 VWC2LB2RUY7 222 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 C11orf98E9PRG8 122 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 KPNA4O00629 521 aaPredicted RBP9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 GPRIN2O60269 458 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 SERPINI2O75830 405 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 LY6HO94772 140 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 IFNGR1P15260 489 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 B4GALT1P15291 398 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 CAPZA2P47755 286 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 CSNK1A1P48729 337 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 BIDP55957 195 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 VLDLRP98155 873 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 NPRL3Q12980 569 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM249Q2WGJ8 235 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 MMEL1Q495T6 779 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 ERICH5Q6P6B1 374 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 VHLLQ6RSH7 139 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF813Q6ZN06 617 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 SLC35D2Q76EJ3 337 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 SLC46A3Q7Z3Q1 461 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 CARM1Q86X55 608 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 SNX32Q86XE0 403 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 OR6N1Q8NGY5 312 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 OR6X1Q8NH79 312 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 NANOS1Q8WY41 292 aaKnown RBP9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 PROX1Q92786 737 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 TMEM54Q969K7 222 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF75AQ96N20 296 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF583Q96ND8 569 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 TNFRSF13CQ96RJ3 184 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 FOXB1Q99853 325 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 ECSITQ9BQ95 431 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 MEPEQ9NQ76 525 aaPredicted RBP9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 NANSQ9NR45 359 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 BAG5Q9UL15 447 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 CADP27708 2225 aa9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 FBN1P35555 2871 aaKnown RBP9.06□□□□□ -0.96
HMGXB3-205ENST00000514469 HIVEP2P31629 2446 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF726A6NNF4 738 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 SLC22A2O15244 555 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 RNF13O43567 381 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 OR5F1O95221 314 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 OR6A2O95222 327 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 IGF2P01344 180 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 HLA-HP01893 362 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 VIMP08670 466 aaKnown RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 PGA4P0DJD7 388 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 PGA3P0DJD8 388 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 ZNF14P17017 642 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 TNFRSF1BP20333 461 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 THBS4P35443 961 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 RBM34P42696 430 aaKnown RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 UGT2B15P54855 530 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 GUCY1A3Q02108 690 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 SF3A3Q12874 501 aaKnown RBP eCLIP9.05□□□□□ -0.962e-10■■■■□ 21
HMGXB3-205ENST00000514469 MELKQ14680 651 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 GSG1Q2KHT4 349 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 C6orf52Q5T4I8 152 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 NANOGNBQ7Z5D8 188 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 LRRC17Q8N6Y2 441 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 IL17RDQ8NFM7 739 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 C10orf82Q8WW14 230 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 SLC25A44Q96H78 314 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 DENND2DQ9H6A0 471 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 MYOZ1Q9NP98 299 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 GID8Q9NWU2 228 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 FBXO9Q9UK97 447 aaPredicted RBP9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 POFUT2Q9Y2G5 429 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 SH3GLB1Q9Y371 365 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 CAPN7Q9Y6W3 813 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 TLN2Q9Y4G6 2542 aa9.05□□□□□ -0.96
HMGXB3-205ENST00000514469 hCG_2039718K7EN88 272 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 NDUFS8O00217 210 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 UBL3O95164 117 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 MT-ND1P03886 318 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 TSPAN19P0C672 248 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 UMPSP11172 480 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 CD79AP11912 226 aa9.04□□□□□ -0.96
HMGXB3-205ENST00000514469 NPR2P20594 1047 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms