RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 ENPP4Q9Y6X5 453 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 RTTNQ86VV8 2226 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 A0A1W2PR80 420 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ZNF503-AS2A6NEH8 195 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ZNF99A8MXY4 864 aaPredicted RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 CENPBD1B2RD01 187 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 E7EQL1 145 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 SOD3P08294 240 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ADORA3P0DMS8 318 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 IFNGR1P15260 489 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 NQO1P15559 274 aaKnown RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 MAKP20794 623 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 MNAT1P51948 309 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 RUNX1T1Q06455 604 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 RPL18Q07020 188 aaKnown RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 CEACAM16Q2WEN9 425 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ARMC4Q5T2S8 1044 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 GKAP1Q5VSY0 366 aaPredicted RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 TMPRSS11FQ6ZWK6 438 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 CCDC36Q8IYA8 594 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 RNF148Q8N7C7 305 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 RBM15BQ8NDT2 890 aaKnown RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 KBTBD8Q8NFY9 601 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 SLC7A13Q8TCU3 470 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ACOT11Q8WXI4 607 aaPredicted RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 SGTBQ96EQ0 304 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 SLC25A44Q96H78 314 aaPredicted RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 NSL1Q96IY1 281 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 UBTD1Q9HAC8 227 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 NMNAT1Q9HAN9 279 aaPredicted RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 GLTPQ9NZD2 209 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ADA2Q9NZK5 511 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 ZNF224Q9NZL3 707 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 RPS6KA6Q9UK32 745 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 MED31Q9Y3C7 131 aa8.47□□□□□ -1.05
RNF4-221ENST00000513643 MAGED1Q9Y5V3 778 aaPredicted RBP8.47□□□□□ -1.05
RNF4-221ENST00000513643 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 IGHV1-18A0A0C4DH31 117 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 ABCD4O14678 606 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 GSTA4O15217 222 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 AKAP8O43823 692 aaKnown RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 PIP5K1CO60331 668 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 PTP4A3O75365 173 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 ZNF682O95780 498 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 WNT11O96014 354 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 IGHMP01871 453 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 PGA4P0DJD7 388 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 PGA3P0DJD8 388 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 CBR1P16152 277 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 ZNF26P17031 533 aaPredicted RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 RHCEP18577 417 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 AHCYP23526 432 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 AQP2P41181 271 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 YAP1P46937 504 aaKnown RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 LIMS1P48059 325 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 ZNF83P51522 516 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 BIDP55957 195 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 VLDLRP98155 873 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 SPOCK1Q08629 439 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 LAPTM4AQ15012 233 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 TRAM2Q15035 370 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 ANKDD1AQ495B1 522 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 SHEQ5VZ18 495 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 C11orf71Q6IPW1 123 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 HMBOX1Q6NT76 420 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 TBPL2Q6SJ96 375 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 KLHL17Q6TDP4 642 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 C16orf89Q6UX73 402 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 B3GLCTQ6Y288 498 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 MBOAT2Q6ZWT7 520 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 DEFB107AQ8IZN7 70 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 ARHGAP24Q8N264 748 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 GPR137CQ8N3F9 429 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 C10orf53Q8N6V4 93 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 CCDC197Q8NCU1 140 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 WFDC11Q8NEX6 87 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 MOSPD2Q8NHP6 518 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 SMAP2Q8WU79 429 aaPredicted RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 FBXW5Q969U6 566 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 BPIFA2Q96DR5 249 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 PYURFQ96I23 114 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 CCL19Q99731 98 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 TRAF4Q9BUZ4 470 aaPredicted RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 FNDC11Q9BVV2 318 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 C1orf21Q9H246 121 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 MOV10Q9HCE1 1003 aaKnown RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 NDE1Q9NXR1 346 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 CISD1Q9NZ45 108 aaKnown RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 RHCGQ9UBD6 479 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 MAGEL2Q9UJ55 1249 aa8.46□□□□□ -1.06
RNF4-221ENST00000513643 SAMD4AQ9UPU9 718 aaKnown RBP8.46□□□□□ -1.06
RNF4-221ENST00000513643 HEATR1Q9H583 2144 aaKnown RBP8.45□□□□□ -1.06
RNF4-221ENST00000513643 A0A096LPE4 126 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 A0A1W2PPZ6 126 aa8.45□□□□□ -1.06
RNF4-221ENST00000513643 ZNF726A6NNF4 738 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms