RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 LILRB4Q8NHJ6 448 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 DNAJC9Q8WXX5 260 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 EME1Q96AY2 570 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 LRRC46Q96FV0 321 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 ADAD1Q96M93 576 aaKnown RBP13.25□□□□□ -0.29
NUP54-213ENST00000513352 ZNF570Q96NI8 536 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 ERMAPQ96PL5 475 aaPredicted RBP13.25□□□□□ -0.29
NUP54-213ENST00000513352 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 OR2M2Q96R28 347 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 RBM24Q9BX46 236 aaKnown RBP13.25□□□□□ -0.29
NUP54-213ENST00000513352 TSSK6Q9BXA6 273 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 ENKD1Q9H0I2 346 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 GABARAPL1Q9H0R8 117 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 SLCO5A1Q9H2Y9 848 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 TXNIPQ9H3M7 391 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 DCLRE1BQ9H816 532 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 PLSCR4Q9NRQ2 329 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 GRHPRQ9UBQ7 328 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 ZNF346Q9UL40 294 aaKnown RBP13.25□□□□□ -0.29
NUP54-213ENST00000513352 POFUT2Q9Y2G5 429 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 RRP15Q9Y3B9 282 aaKnown RBP13.25□□□□□ -0.29
NUP54-213ENST00000513352 ADAM18Q9Y3Q7 739 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 ORC6Q9Y5N6 252 aa13.25□□□□□ -0.29
NUP54-213ENST00000513352 SPTBN1Q01082 2364 aaKnown RBP13.24□□□□□ -0.29
NUP54-213ENST00000513352 UBR5O95071 2799 aaPredicted RBP13.24□□□□□ -0.29
NUP54-213ENST00000513352 TEX13CA0A0J9YWL9 993 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 XKRYO14609 159 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 EI24O14681 340 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 CGAP01215 116 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 IGHG1P01857 330 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 RNF224P0DH78 156 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 NOS3P29474 1203 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 LGALS3BPQ08380 585 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 SLC36A3Q495N2 470 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 BEND4Q6ZU67 534 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 OR8D4Q8NGM9 314 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 ASB10Q8WXI3 467 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 ZNF566Q969W8 418 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 RASD2Q96D21 266 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 Q96M85 177 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 ALKBH3Q96Q83 286 aaPredicted RBP13.24□□□□□ -0.29
NUP54-213ENST00000513352 RBM4BQ9BQ04 359 aaKnown RBP13.24□□□□□ -0.29
NUP54-213ENST00000513352 C9orf16Q9BUW7 83 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 RBM4Q9BWF3 364 aaKnown RBP13.24□□□□□ -0.29
NUP54-213ENST00000513352 PLA2G12AQ9BZM1 189 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 B3GAT2Q9NPZ5 323 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 SLC7A10Q9NS82 523 aa13.24□□□□□ -0.29
NUP54-213ENST00000513352 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
NUP54-213ENST00000513352 A6NIZ1 184 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 OR6C65A6NJZ3 312 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 M0R3G1 203 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 SOCS2O14508 198 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
NUP54-213ENST00000513352 IGHMP01871 453 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 OSMP13725 252 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 SDHAP31040 664 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 CSNK1A1P48729 337 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 RAP1BP61224 184 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 RAP1AP62834 184 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 CD47Q08722 323 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 FAPQ12884 760 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
NUP54-213ENST00000513352 DAG1Q14118 895 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 TSPO2Q5TGU0 170 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 FBXW9Q5XUX1 488 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 FAM205BPQ63HN1 556 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 ZBTB49Q6ZSB9 765 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 ABHD12BQ7Z5M8 362 aaPredicted RBP13.23□□□□□ -0.29
NUP54-213ENST00000513352 JAZF1Q86VZ6 243 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 WDFY1Q8IWB7 410 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 CBR4Q8N4T8 237 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 CLDN22Q8N7P3 220 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 POMGNT2Q8NAT1 580 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 SYT14Q8NB59 555 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 NOXO1Q8NFA2 376 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 MAGEE2Q8TD90 523 aaPredicted RBP13.23□□□□□ -0.29
NUP54-213ENST00000513352 SLC25A44Q96H78 314 aaPredicted RBP13.23□□□□□ -0.29
NUP54-213ENST00000513352 GPX7Q96SL4 187 aaPredicted RBP13.23□□□□□ -0.29
NUP54-213ENST00000513352 REV1Q9UBZ9 1251 aa13.23□□□□□ -0.29
NUP54-213ENST00000513352 NPIPB13A6NJU9 1138 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 A8MXE2 369 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 NPIPB4C9JG80 1138 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 ZNF587BE7ETH6 402 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 H7C1C5 153 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 ARHGEF9O43307 516 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 UPK3AO75631 287 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 TRMUO75648 421 aaKnown RBP13.22□□□□□ -0.29
NUP54-213ENST00000513352 ZNF432O94892 652 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 ACADSP16219 412 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 CDH2P19022 906 aaPredicted RBP13.22□□□□□ -0.29
NUP54-213ENST00000513352 LCN6P62502 163 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 MYBPC1Q00872 1141 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 RUNX1T1Q06455 604 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 SLC35F1Q5T1Q4 408 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 LPCAT4Q643R3 524 aa13.22□□□□□ -0.29
NUP54-213ENST00000513352 KDM4DQ6B0I6 523 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms