RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MSTNO14793 375 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 EEF1E1O43324 174 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 PTP4A3O75365 173 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 MRPL33O75394 65 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CNOT4O95628 575 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 BAG2O95816 211 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 BCL10O95999 233 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CGAP01215 116 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 F13BP05160 661 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CD14P08571 375 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 FAM157BP0CG42 384 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 HLA-DOBP13765 273 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ANPEPP15144 967 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 IFNGR1P15260 489 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 PRKACGP22612 351 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 SLC6A6P31641 620 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 RPL4P36578 427 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 OR3A2P47893 321 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ASCL1P50553 236 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 DAP3P51398 398 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CLDN17P56750 224 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 FXYD6P3P58550 94 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CTXN1P60606 82 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 PPP2R2BQ00005 443 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 MELKQ14680 651 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 FAM205BPQ63HN1 556 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 KDM4DQ6B0I6 523 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 GPR139Q6DWJ6 353 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 NIPAL3Q6P499 406 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 FAHD1Q6P587 224 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 SMARCD3Q6STE5 483 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 KLHL17Q6TDP4 642 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CLEC18BQ6UXF7 455 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 TFAP2EQ6VUC0 442 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 SLC35D2Q76EJ3 337 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 AAED1Q7RTV5 226 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 NUFIP2Q7Z417 695 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 BTLAQ7Z6A9 289 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 STK32CQ86UX6 486 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CCDC71Q8IV32 467 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ZNF100Q8IYN0 542 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 PARP8Q8N3A8 854 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 FAM26EQ8N5C1 309 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ZIC4Q8N9L1 334 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CLEC18CQ8NCF0 446 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 OR6X1Q8NH79 312 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 MOSPD2Q8NHP6 518 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 TEX47Q8TBZ9 253 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 SSC4DQ8WTU2 575 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CA5BP1Q8WTZ4 195 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ITLN2Q8WWU7 325 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ASB10Q8WXI3 467 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 APH1AQ96BI3 265 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 STARD4Q96DR4 205 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 TNFRSF13CQ96RJ3 184 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 CIB1Q99828 191 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 RBM4BQ9BQ04 359 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 RBM4Q9BWF3 364 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 POLDIP3Q9BY77 421 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 UCK2Q9BZX2 261 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 TXNIPQ9H3M7 391 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 EGLN3Q9H6Z9 239 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 C12orf49Q9H741 205 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 NRIP3Q9NQ35 241 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 PLSCR4Q9NRQ2 329 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 KRT84Q9NSB2 600 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 TBC1D23Q9NUY8 699 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 MED29Q9NX70 200 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 IL20Q9NYY1 176 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 ENOPH1Q9UHY7 261 aa6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 MAGED1Q9Y5V3 778 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-204ENST00000513318 HELZ2Q9BYK8 2649 aaKnown RBP6.71□□□□□ -1.33
HMGXB3-204ENST00000513318 RTTNQ86VV8 2226 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 WIPF3A6NGB9 483 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF726A6NNF4 738 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 FAM90A27PA6NNH2 459 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 CENPBD1B2RD01 187 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 EI24O14681 340 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC43A1O75387 559 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 SMNDC1O75940 238 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF432O94892 652 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 SOX14O95416 240 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 CLDN14O95500 239 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 TP53P04637 393 aaPredicted RBP6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 NR2C1P13056 603 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 OSMP13725 252 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 APEHP13798 732 aaKnown RBP6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF26P17031 533 aaPredicted RBP6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 IGFBP5P24593 272 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 NTF4P34130 210 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 SELENOPP49908 381 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 DAPP51397 102 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 RPS6KA3P51812 740 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 BIDP55957 195 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 RPL27P61353 136 aaKnown RBP6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 TOP3AQ13472 1001 aaPredicted RBP6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 DAG1Q14118 895 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 ACKR1Q16570 336 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 RFX4Q33E94 735 aa6.71□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC36A3Q495N2 470 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms