RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TMEM171Q8WVE6 324 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 PHYHIPQ92561 330 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ITFG2Q969R8 447 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 CNOT2Q9NZN8 540 aaKnown RBP3.91□□□□□ -1.78
VCAN-209ENST00000513016 FBXL4Q9UKA2 621 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 ZNF281Q9Y2X9 895 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 B3GALT1Q9Y5Z6 326 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 KAT6AQ92794 2004 aa3.91□□□□□ -1.78
VCAN-209ENST00000513016 SNNO75324 88 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 APOL3O95236 402 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 FCER2P06734 321 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 NFYBP25208 207 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 RNF4P78317 190 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 MAP4K2Q12851 820 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 PDLIM3Q53GG5 364 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 AADACL3Q5VUY0 350 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 HACD4Q5VWC8 232 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 C22orf42Q6IC83 251 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 DHRS4L2Q6PKH6 230 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 FAM109AQ8N4B1 249 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 LKAAEAR1Q8TD35 194 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 C8orf44Q96CB5 159 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 PLA2G2FQ9BZM2 168 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 LIN28AQ9H9Z2 209 aaKnown RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 EBF1Q9UH73 591 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 B3GALT5Q9Y2C3 310 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ATG4BQ9Y4P1 393 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 HRH3Q9Y5N1 445 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 MDFIC2A0A1B0GVS7 189 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 OR6C6A6NF89 314 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 CLDN24A6NM45 220 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ST8SIA5O15466 376 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 AKAIN1P0CW23 69 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 C21orf33P30042 268 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 PIGFQ07326 219 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 C6orf183Q5T699 404 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ESPNLQ6ZVH7 1005 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 USP51Q70EK9 711 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 PRSS48Q7RTY5 328 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 SERPINA12Q8IW75 414 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ENTHD1Q8IYW4 607 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 BEST3Q8N1M1 668 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 CLDN22Q8N7P3 220 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 M1APQ8TC57 530 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ZFP90Q8TF47 636 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 S1PR3Q99500 378 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 SLC22A11Q9NSA0 550 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 TMA7Q9Y2S6 64 aaKnown RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 GPR45Q9Y5Y3 372 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 MYH1P12882 1939 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 CRYM-AS1A6NIL9 109 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ZNF736B4DX44 427 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 F5H0A9 414 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 ACOT8O14734 319 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 OR8U9P0C7N5 309 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 GPX3P22352 226 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 GFERP55789 205 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 CXCR4P61073 352 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 LCN6P62502 163 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 HBA1P69905 142 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 CAMK2BQ13554 666 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 GTDC1Q4AE62 458 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ACSM3Q53FZ2 586 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 PRAMEF9Q5VWM5 478 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ZNF517Q6ZMY9 492 aaPredicted RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 FNDC9Q8TBE3 224 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 FBXO17Q96EF6 278 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 MUS81Q96NY9 551 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 SULT4A1Q9BR01 284 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 TXLNGYQ9BZA5 131 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 BABAM2Q9NXR7 383 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 ASIC5Q9NY37 505 aa3.9□□□□□ -1.78
VCAN-209ENST00000513016 CNOT11Q9UKZ1 510 aaKnown RBP3.9□□□□□ -1.78
VCAN-209ENST00000513016 KIR2DS1A0A191URI9 304 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 ANKRD61A6NGH8 418 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 M0R036 132 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 LGALS8O00214 317 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 P2RX6O15547 441 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 OR2J2O76002 312 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 NFYAP23511 347 aaPredicted RBP3.9□□□□□ -1.79
VCAN-209ENST00000513016 DDOSTP39656 456 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 KIR2DS4P43632 304 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 HSF1Q00613 529 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 FZD2Q14332 565 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 KIR2DS1Q14954 304 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 PAN3Q58A45 887 aaKnown RBP3.9□□□□□ -1.79
VCAN-209ENST00000513016 HES5Q5TA89 166 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 BRICD5Q6PL45 260 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 SLC22A24Q8N4F4 322 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 NKAIN3Q8N8D7 197 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 OR10X1Q8NGY0 326 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 PATE1Q8WXA2 126 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 LRFN5Q96NI6 719 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 S1PR5Q9H228 398 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 ZNF71Q9NQZ8 489 aaPredicted RBP3.9□□□□□ -1.79
VCAN-209ENST00000513016 MRPS28Q9Y2Q9 187 aaKnown RBP3.9□□□□□ -1.79
VCAN-209ENST00000513016 GPR52Q9Y2T5 361 aa3.9□□□□□ -1.79
VCAN-209ENST00000513016 MED16Q9Y2X0 877 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms