RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 LIPKQ5VXJ0 399 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 PDPK2PQ6A1A2 396 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 PTRHD1Q6GMV3 140 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 RHBDD2Q6NTF9 364 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 TTC23LQ6PF05 361 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 CES3Q6UWW8 571 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 TMEM26Q6ZUK4 368 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 SNX20Q7Z614 316 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ZNF619Q8N2I2 560 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 CLDN19Q8N6F1 224 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 OR4D9Q8NGE8 314 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 OR52E1Q8NGJ3 308 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 OR4F5Q8NH21 305 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 LCN9Q8WX39 176 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ELMO1Q92556 727 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 MAGOHBQ96A72 148 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 TMEM159Q96B96 161 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ZBED6CLQ96FA7 236 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 MS4A14Q96JA4 679 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ZNF514Q96K75 400 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 DNAJC1Q96KC8 554 aaKnown RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 CAPZA3Q96KX2 299 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 LYSMD1Q96S90 227 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 NDUFAF3Q9BU61 184 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 TSSK1BQ9BXA7 367 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 SRMSQ9H3Y6 488 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 XKR8Q9H6D3 395 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 VPS37BQ9H9H4 285 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 GPN2Q9H9Y4 310 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 APMAPQ9HDC9 416 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 NRN1Q9NPD7 142 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 ESM1Q9NQ30 184 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 CHRAC1Q9NRG0 131 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 NLE1Q9NVX2 485 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 BFARQ9NZS9 450 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 EMCNQ9ULC0 261 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 FZR1Q9UM11 496 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 PCYT1BQ9Y5K3 369 aaPredicted RBP3.37□□□□□ -1.87
HTT-210ENST00000512909 HEBP2Q9Y5Z4 205 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 MAD1L1Q9Y6D9 718 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 NUP205Q92621 2012 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 PLXNA2O75051 1894 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 GPR179Q6PRD1 2367 aa3.37□□□□□ -1.87
HTT-210ENST00000512909 MUC22E2RYF6 1773 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 A0A0U1RRA0 63 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 A0A1W2PNU3 283 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 HEATR9A2RTY3 570 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FOXI3A8MTJ6 420 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 EPM2AB3EWF7 344 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 GPR89AB7ZAQ6 455 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 GOLGA8KD6RF30 607 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 GOLGA8TH3BQL2 631 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 PFDN6O15212 129 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 RAD1O60671 282 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 STK17BO94768 372 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 KIAA0754O94854 1291 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 VAPBO95292 243 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 AP2A1O95782 977 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FTH1P02794 183 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 KLK3P07288 261 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 GPR89BP0CG08 455 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 LIPCP11150 499 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SELEP16581 610 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 TCN2P20062 427 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 PRDX6P30041 224 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 ADRA1AP35348 466 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 DLSTP36957 453 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FNTAP49354 379 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 GFERP55789 205 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 GNG11P61952 73 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SRSF6Q13247 344 aaKnown RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 NUMA1Q14980 2115 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 INAQ16352 499 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 DEFB109BQ30KR1 87 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 MLIPQ5VWP3 458 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 MEDAGQ5VYS4 303 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 LEMD1Q68G75 181 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FAM199XQ6PEV8 388 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 WDR74Q6RFH5 385 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 NLRP9Q7RTR0 991 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 MYPOPQ86VE0 399 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 SLC22A16Q86VW1 577 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 OOSP2Q86WS3 158 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 HIPK1Q86Z02 1210 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 CCDC71Q8IV32 467 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 KRT222Q8N1A0 295 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SLC35F6Q8N357 371 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 C17orf47Q8NEP4 570 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 SSC4DQ8WTU2 575 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 TFGQ92734 400 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 LHX4Q969G2 390 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 ANKRD9Q96BM1 317 aaPredicted RBP3.36□□□□□ -1.87
HTT-210ENST00000512909 C14orf79Q96F83 325 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 C9orf72Q96LT7 481 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 VPS35Q96QK1 796 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 TIMM29Q9BSF4 260 aa3.36□□□□□ -1.87
HTT-210ENST00000512909 CARD6Q9BX69 1037 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms