RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CARTPTQ16568 116 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 MST1LQ2TV78 715 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 IQCCQ4KMZ1 466 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 TNFAIP8L3Q5GJ75 292 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 ZNF311Q5JNZ3 666 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 C6orf10Q5SRN2 563 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 NIPAL3Q6P499 406 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 NET1Q7Z628 596 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 LSRQ86X29 649 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 CLIP4Q8N3C7 705 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 GPR137CQ8N3F9 429 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 ANKRD42Q8N9B4 389 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 IL17RDQ8NFM7 739 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 BBS10Q8TAM1 723 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 C3orf49Q96BT1 292 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 SLC25A36Q96CQ1 311 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 TMEM19Q96HH6 336 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 ANKRD27Q96NW4 1050 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 ALKBH3Q96Q83 286 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 VRK1Q99986 396 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 WDR55Q9H6Y2 383 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 C12orf10Q9HB07 376 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 NKIRAS1Q9NYS0 192 aa6.24□□□□□ -1.41
USP46-208ENST00000512656 CRNNQ9UBG3 495 aaPredicted RBP6.24□□□□□ -1.41
USP46-208ENST00000512656 TMEM120BA0PK00 339 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 VWC2LB2RUY7 222 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 UPK3AO75631 287 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 LY6HO94772 140 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 IGLV1-44P01699 117 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 OR4A8P0C604 315 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 CECR9P0C854 216 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 PNMTP11086 282 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 PRG2P13727 222 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 CBR1P16152 277 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 ZNF23P17027 643 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 NPR2P20594 1047 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 ARR3P36575 388 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 IDH3GP51553 393 aaPredicted RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 P2RY4P51582 365 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 MVDP53602 400 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SLC18A1P54219 525 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 CLDN17P56750 224 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 STX1BP61266 288 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 ARF1P84077 181 aaKnown RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 IL1RL1Q01638 556 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 ROR2Q01974 943 aaKnown RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 MAPK11Q15759 364 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 VHLLQ6RSH7 139 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 UGT2A3Q6UWM9 527 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SERPINA11Q86U17 422 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SNX32Q86XE0 403 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 KRT73Q86Y46 540 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 EPHX4Q8IUS5 362 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 MIER2Q8N344 545 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 PIK3C3Q8NEB9 887 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 NUP37Q8NFH4 326 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 DNAJA4Q8WW22 397 aaPredicted RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 NEU4Q8WWR8 484 aaPredicted RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 SLC38A4Q969I6 547 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 MAELQ96JY0 434 aaKnown RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 FOXN4Q96NZ1 517 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 OXGR1Q96P68 337 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SORCS2Q96PQ0 1159 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SPATA5L1Q9BVQ7 753 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 PARD6BQ9BYG5 372 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 PLK3Q9H4B4 646 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 ZNF442Q9H7R0 627 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 CHODLQ9H9P2 273 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 BCL2L10Q9HD36 194 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 A4GALTQ9NPC4 353 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 B3GAT2Q9NPZ5 323 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SDR39U1Q9NRG7 319 aaPredicted RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 SLC6A13Q9NSD5 602 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 SELENONQ9NZV5 590 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.23□□□□□ -1.41
USP46-208ENST00000512656 USP22Q9UPT9 525 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 V9GYY5 206 aaPredicted RBP6.23□□□□□ -1.41
USP46-208ENST00000512656 ARFGEF3Q5TH69 2177 aa6.23□□□□□ -1.41
USP46-208ENST00000512656 TRAV36DV7A0A075B6V5 113 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 LOC102725191A0A1B0GVB3 256 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 FTCDNL1E5RQL4 147 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 CLIC1O00299 241 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 NR5A2O00482 541 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 ENTPD5O75356 428 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 TGFAP01135 160 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 IGKV3-15P01624 115 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 ETS2P15036 469 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 PCMT1P22061 227 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 PPIBP23284 216 aaKnown RBP6.22□□□□□ -1.41
USP46-208ENST00000512656 IGFBP5P24593 272 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 PRKAR1BP31321 381 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 THBS4P35443 961 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 RPS5P46782 204 aaKnown RBP6.22□□□□□ -1.41
USP46-208ENST00000512656 CAPZA2P47755 286 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 CHN2P52757 468 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 NCALDP61601 193 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 SQLEQ14534 574 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 RGNQ15493 299 aa6.22□□□□□ -1.41
USP46-208ENST00000512656 ADIPOQQ15848 244 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms