RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 DHRS4L1P0CG22 281 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 CST5P28325 142 aaPredicted RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 BLVRBP30043 206 aaPredicted RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 FCER1GP30273 86 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 ID4P47928 161 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 PRDX1Q06830 199 aaKnown RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 SLC9A3R2Q15599 337 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 TATDN3Q17R31 274 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 RTL8BQ17RB0 113 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 ACTBL2Q562R1 376 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 PRAMEF5Q5TYX0 476 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 PRAMEF6Q5VXH4 476 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 C17orf107Q6ZR85 190 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 YRDCQ86U90 279 aaKnown RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 ENDOVQ8N8Q3 282 aaKnown RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 OR9Q2Q8NGE9 314 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 LGALS12Q96DT0 336 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 C4orf36Q96KX1 117 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 ADAM19Q9H013 955 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 PPIL3Q9H2H8 161 aaKnown RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 SLC38A1Q9H2H9 487 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 LIN28AQ9H9Z2 209 aaKnown RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 SCPEP1Q9HB40 452 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 LUZP4Q9P127 313 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 PTPRZ1P23471 2315 aaPredicted RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 A0A0D9SG52 128 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 METTL15A6NJ78 407 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 K7EPK0 472 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 UTS2O95399 124 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 TAS2R19P59542 299 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 ERVPABLB-1P60509 514 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 SELENOWP63302 87 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 HOXA4Q00056 320 aaPredicted RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 SLC10A2Q12908 348 aaPredicted RBP5.35□□□□□ -1.55
USP38-203ENST00000511739 ENTPD8Q5MY95 495 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 H2BFWTQ7Z2G1 175 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 OR6V1Q8N148 313 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 FAM71E2Q8N5Q1 922 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 OR4M1Q8NGD0 313 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 FBXO17Q96EF6 278 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 KIRREL1Q96J84 757 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 FAM210AQ96ND0 272 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 CSNK1G1Q9HCP0 422 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 PRDM9Q9NQV7 894 aa5.35□□□□□ -1.55
USP38-203ENST00000511739 SSC5DA1L4H1 1573 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 ARPC3O15145 178 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 P2RX6O15547 441 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 GALR2O43603 387 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 TBX10O75333 385 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 DNAJB5O75953 348 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 RASAL1O95294 804 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 LY86O95711 162 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 TFP02787 698 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MT-ND4P03905 459 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 CTSCP53634 463 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SNRPD2P62316 118 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 SRPXP78539 464 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 DUSP2Q05923 314 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MFGE8Q08431 387 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 TNK1Q13470 666 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SMAD4Q13485 552 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 GK2Q14410 553 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 RAB35Q15286 201 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 NKAIN1Q4KMZ8 207 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 NXNL2Q5VZ03 156 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 BLOC1S3Q6QNY0 202 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 TMEM64Q6YI46 380 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 USP51Q70EK9 711 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 MEX3DQ86XN8 651 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 VRK2Q86Y07 508 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 PM20D2Q8IYS1 436 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 BEST4Q8NFU0 473 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 OR8J2Q8NGG1 315 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 FUBP1Q96AE4 644 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 RAB3CQ96E17 227 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SLC45A3Q96JT2 553 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 TINAGL1Q9GZM7 467 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 RNF32Q9H0A6 362 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 IKZF5Q9H5V7 419 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SLC22A11Q9NSA0 550 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SLC5A6Q9Y289 635 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 TRAV36DV7A0A075B6V5 113 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 NCBP2LA6PVI3 153 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 PLRG1O43660 514 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 PENKP01210 267 aaPredicted RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 METTL15P1P0C7V9 234 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 CTRB1P17538 263 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 HNF1AP20823 631 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SELPLGQ14242 412 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 CTRB2Q6GPI1 263 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 SLC35F3Q8IY50 421 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 ADGRG5Q8IZF4 528 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 LMNTD1Q8N9Z9 388 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 REEP6Q96HR9 211 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 PRRX2Q99811 253 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 INPP5KQ9BT40 448 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 DDX31Q9H8H2 851 aaKnown RBP5.34□□□□□ -1.55
USP38-203ENST00000511739 PLEKHF2Q9H8W4 249 aa5.34□□□□□ -1.55
USP38-203ENST00000511739 IL17CQ9P0M4 197 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms