RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CDH11P55287 796 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 RGS8P57771 180 aaPredicted RBP7.52□□□□□ -1.21
PDPN-209ENST00000510906 LTBQ06643 244 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 DMTNQ08495 405 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 SF3A3Q12874 501 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDPN-209ENST00000510906 NFYCQ13952 458 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
PDPN-209ENST00000510906 CYP51A1Q16850 503 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ALG10BQ5I7T1 473 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 OR7E24Q6IFN5 339 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 NIPAL3Q6P499 406 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 TMEM108Q6UXF1 575 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 CLEC9AQ6UXN8 241 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 B3GLCTQ6Y288 498 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 LINGO2Q7L985 606 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 SSX8Q7RTT4 187 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ARMC8Q8IUR7 673 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 EPHX4Q8IUS5 362 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 LSMEM1Q8N8F7 131 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 POMGNT2Q8NAT1 580 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 SMYD1Q8NB12 490 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 C11orf65Q8NCR3 313 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 TAAR8Q969N4 342 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ANKRD27Q96NW4 1050 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 TRAF4Q9BUZ4 470 aaPredicted RBP7.52□□□□□ -1.21
PDPN-209ENST00000510906 TMEM120AQ9BXJ8 343 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 C12orf10Q9HB07 376 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 SLC17A5Q9NRA2 495 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ZNF446Q9NWS9 450 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 CISD1Q9NZ45 108 aaKnown RBP7.52□□□□□ -1.21
PDPN-209ENST00000510906 TESQ9UGI8 421 aaKnown RBP7.52□□□□□ -1.21
PDPN-209ENST00000510906 ANGPT4Q9Y264 503 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 RASD1Q9Y272 281 aa7.52□□□□□ -1.21
PDPN-209ENST00000510906 ZNF503-AS2A6NEH8 195 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 PRORSD1PA6NEY8 169 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 E7EQL1 145 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 M0QX08 132 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 M0R3H8 397 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 FBP2O00757 339 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 FZD7O75084 574 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 NDUFS7O75251 213 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 UPK3AO75631 287 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 SERPINB7O75635 380 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 KRT33AO76009 404 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 LY6G6DO95868 133 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 LGI1O95970 557 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 CD8AP01732 235 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 LPLP06858 475 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 OSMP13725 252 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 CBLP22681 906 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 PTAFRP25105 342 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 GTF2E2P29084 291 aaKnown RBP7.51□□□□□ -1.21
PDPN-209ENST00000510906 GRPRP30550 384 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 CLDN17P56750 224 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 NCALDP61601 193 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 TGFBR3Q03167 851 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 RBBP4Q09028 425 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 OR1Q1Q15612 314 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 HIKESHIQ53FT3 197 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 FAM69AQ5T7M9 428 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 METTL21CQ5VZV1 264 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 CGB2Q6NT52 195 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 ULK3Q6PHR2 472 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 SLC22A25Q6T423 547 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 KLHL17Q6TDP4 642 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 NET1Q7Z628 596 aaPredicted RBP7.51□□□□□ -1.21
PDPN-209ENST00000510906 C17orf78Q8N4C9 275 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 GPR32P1Q8NGA4 272 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 TSPEARQ8WU66 669 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 DNAJA4Q8WW22 397 aaPredicted RBP7.51□□□□□ -1.21
PDPN-209ENST00000510906 SLC47A1Q96FL8 570 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 ALKBH3Q96Q83 286 aaPredicted RBP7.51□□□□□ -1.21
PDPN-209ENST00000510906 SIKE1Q9BRV8 207 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 BDH2Q9BUT1 245 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 KAT8Q9H7Z6 458 aaKnown RBP7.51□□□□□ -1.21
PDPN-209ENST00000510906 TMEM27Q9HBJ8 222 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 FGFR1OP2Q9NVK5 253 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 B3GAT1Q9P2W7 334 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 SLC13A4Q9UKG4 626 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 AMDHD2Q9Y303 409 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 VPS13CQ709C8 3753 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 CSPG4Q6UVK1 2322 aa7.51□□□□□ -1.21
PDPN-209ENST00000510906 TRAV36DV7A0A075B6V5 113 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 A0A087WUJ7 227 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 A0A0B4J2E0 115 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 A0A1B0GX12 115 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 ZNF587BE7ETH6 402 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 LRRN3E7EW58 273 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 AIM2O14862 343 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 OR2T1O43869 369 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 APOL3O95236 402 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 IGHV4-39P01824 125 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 HEXAP06865 529 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 ZNF43P17038 809 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 CDH12P55289 794 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 TNK1Q13470 666 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 NPTX1Q15818 432 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 NRF1Q16656 503 aa7.5□□□□□ -1.21
PDPN-209ENST00000510906 DUSP7Q16829 419 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms