RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GLRXP35754 106 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 RBMXP38159 391 aaKnown RBP13.63□□□□□ -0.23
RAB40C-202ENST00000509637 MAGEB1P43366 347 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 EVX1P49640 407 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 ERVS71-1P61550 626 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 GSG1Q2KHT4 349 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 ALKBH6Q3KRA9 238 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 ALG10BQ5I7T1 473 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 TMEM255AQ5JRV8 349 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 C6orf10Q5SRN2 563 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 LRFN4Q6PJG9 635 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 DHRS4L2Q6PKH6 230 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 UEVLDQ8IX04 471 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 ADPRHL1Q8NDY3 354 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 BBS10Q8TAM1 723 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 LRR1Q96L50 414 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 HIF1ANQ9NWT6 349 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 SPEF1Q9Y4P9 236 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 A0A0B4J2E0 115 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 A0A1B0GX12 115 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 TRPC5OSA6NMA1 111 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 B4DSR2 109 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 PLPP3O14495 311 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 OR2T1O43869 369 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 GAAP10253 952 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 PRKAR1BP31321 381 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 PTDSS1P48651 473 aaKnown RBP13.62□□□□□ -0.23
RAB40C-202ENST00000509637 CDH12P55289 794 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 RAB1AP62820 205 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 OR1Q1Q15612 314 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 HHATQ5VTY9 493 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 LINC00114Q6XXX2 140 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 THSD4Q6ZMP0 1018 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 NET1Q7Z628 596 aaPredicted RBP13.62□□□□□ -0.23
RAB40C-202ENST00000509637 CCDC36Q8IYA8 594 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 IL17RDQ8NFM7 739 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 TMEM186Q96B77 213 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 TRIM44Q96DX7 344 aaPredicted RBP13.62□□□□□ -0.23
RAB40C-202ENST00000509637 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 VAPAQ9P0L0 249 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
RAB40C-202ENST00000509637 M0R233 179 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 UBDO15205 165 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 CCL2P13500 99 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 GPR6P46095 362 aaPredicted RBP13.61□□□□□ -0.23
RAB40C-202ENST00000509637 NPTX1Q15818 432 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 KIRREL3Q8IZU9 778 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 GPR32P1Q8NGA4 272 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 OR6S1Q8NH40 331 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 RDH5Q92781 318 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 FOXB1Q99853 325 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 RMND5AQ9H871 391 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 G6PC2Q9NQR9 355 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 MRPL39Q9NYK5 338 aaKnown RBP13.61□□□□□ -0.23
RAB40C-202ENST00000509637 TAS2R5Q9NYW4 299 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 RPS6KB2Q9UBS0 482 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 CACNG2Q9Y698 323 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 WNK2Q9Y3S1 2297 aa13.61□□□□□ -0.23
RAB40C-202ENST00000509637 SERPINI2O75830 405 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 MSMBP08118 114 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 ACHEP22303 614 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 GTF2E2P29084 291 aaKnown RBP13.6□□□□□ -0.23
RAB40C-202ENST00000509637 CDK6Q00534 326 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 FADDQ13158 208 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 PMS2P3Q13401 168 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 ULK3Q6PHR2 472 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 EPGNQ6UW88 154 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 RBM45Q8IUH3 476 aaKnown RBP13.6□□□□□ -0.23
RAB40C-202ENST00000509637 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 DNAJA4Q8WW22 397 aaPredicted RBP13.6□□□□□ -0.23
RAB40C-202ENST00000509637 LRRC37BQ96QE4 947 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 SH3GL3Q99963 347 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 MOV10Q9HCE1 1003 aaKnown RBP13.6□□□□□ -0.23
RAB40C-202ENST00000509637 FBXO9Q9UK97 447 aaPredicted RBP13.6□□□□□ -0.23
RAB40C-202ENST00000509637 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 POFUT2Q9Y2G5 429 aa13.6□□□□□ -0.23
RAB40C-202ENST00000509637 VSTM5A8MXK1 200 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 C11orf98E9PRG8 122 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 KCNAB3O43448 404 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 DEAF1O75398 565 aaPredicted RBP13.59□□□□□ -0.23
RAB40C-202ENST00000509637 MFN2O95140 757 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 FAM157BP0CG42 384 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 SAGP10523 405 aaPredicted RBP13.59□□□□□ -0.23
RAB40C-202ENST00000509637 NQO1P15559 274 aaKnown RBP13.59□□□□□ -0.23
RAB40C-202ENST00000509637 AQP1P29972 269 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
RAB40C-202ENST00000509637 BIDP55957 195 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 PUDPQ08623 228 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 TRMT5Q32P41 509 aaKnown RBP13.59□□□□□ -0.23
RAB40C-202ENST00000509637 SPRNQ5BIV9 151 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 GCNT6Q5T4J0 391 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 AVPI1Q5T686 147 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 BLOC1S3Q6QNY0 202 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 GLCCI1Q86VQ1 547 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms