RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ARHGDIGQ99819 225 aa11.79□□□□□ -0.52
CCHCR1-227ENST00000508852 ULBP2Q9BZM5 246 aa11.79□□□□□ -0.52
CCHCR1-227ENST00000508852 MS4A5Q9H3V2 200 aa11.79□□□□□ -0.52
CCHCR1-227ENST00000508852 VIPAS39Q9H9C1 493 aa11.79□□□□□ -0.52
CCHCR1-227ENST00000508852 DYNLRB1Q9NP97 96 aa11.79□□□□□ -0.52
CCHCR1-227ENST00000508852 SEC14L4Q9UDX3 406 aa11.79□□□□□ -0.52
CCHCR1-227ENST00000508852 SLC22A23A1A5C7 686 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 M0QX08 132 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 RAB36O95755 333 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 ADORA3P0DMS8 318 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 CD79AP11912 226 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 ZNF23P17027 643 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 PCMT1P22061 227 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 NR4A1P22736 598 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 GIFP27352 417 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 AQP1P29972 269 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 THBS4P35443 961 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 CSNK1A1P48729 337 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 CHN2P52757 468 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 TUBA1BP68363 451 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 TUBA4AP68366 448 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 GALK2Q01415 458 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 HGFACQ04756 655 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 ZP4Q12836 540 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 NPRL3Q12980 569 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 CYLC2Q14093 348 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 CARTPTQ16568 116 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 LINC00114Q6XXX2 140 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 TUBA1AQ71U36 451 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 SPATA21Q7Z572 469 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 MDP1Q86V88 176 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 OR6X1Q8NH79 312 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 CKAP2Q8WWK9 683 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 DOK1Q99704 481 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 FOXB1Q99853 325 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 POLR2J2Q9GZM3 115 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 POLR2J3Q9H1A7 115 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 C1orf198Q9H425 327 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 IKZF5Q9H5V7 419 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 NANSQ9NR45 359 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 B3GNT2Q9NY97 397 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 ZNF229Q9UJW7 825 aa11.78□□□□□ -0.52
CCHCR1-227ENST00000508852 DNHD1Q96M86 4753 aa11.77□□□□□ -0.52
CCHCR1-227ENST00000508852 LOC100289279A0A1B0GTE1 492 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 TRAPPC13A5PLN9 417 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 FARS2O95363 451 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 STAMBPO95630 424 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 NPPAP01160 153 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 PTHP01270 115 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 IFNA14P01570 189 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 DAOP14920 347 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 CBLP22681 906 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 PCGF2P35227 344 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 GLRXP35754 106 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 SNTB2Q13425 540 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 NFYCQ13952 458 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 NPTX1Q15818 432 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 NRN1LQ496H8 165 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 ENTPD8Q5MY95 495 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 CARD17Q5XLA6 110 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 PTOV1Q86YD1 416 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 PCDHAC1Q9H158 963 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 KAT8Q9H7Z6 458 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 NOX3Q9HBY0 568 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 GPR160Q9UJ42 338 aa11.77□□□□□ -0.53
CCHCR1-227ENST00000508852 HTR3EA5X5Y0 456 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 CENPBD1B2RD01 187 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 SYNGR3O43761 229 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 TPST2O60704 377 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 HPRP00739 348 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 IGF2P01344 180 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 HLA-DOBP13765 273 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 SRD5A1P18405 259 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 CD247P20963 164 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 SELENOVP59797 346 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 RAB1AP62820 205 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 CAMK2DQ13557 499 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 ZNF74Q16587 644 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 DUSP7Q16829 419 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 MMEL1Q495T6 779 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 TTMPQ5BVD1 217 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 GKAP1Q5VSY0 366 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 C10orf111Q8N326 155 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 SVOPLQ8N434 492 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 ANKS4BQ8N8V4 417 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 ADAMTS16Q8TE57 1224 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 UBASH3BQ8TF42 649 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 ZNF566Q969W8 418 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 MRPL24Q96A35 216 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 ZNF837Q96EG3 531 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 SLC25A44Q96H78 314 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
CCHCR1-227ENST00000508852 EMC6Q9BV81 110 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms