RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 COMMD3Q9UBI1 195 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 RPS6KB2Q9UBS0 482 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 GHRLQ9UBU3 117 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 MRTO4Q9UKD2 239 aaKnown RBP4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 TBX21Q9UL17 535 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 LSM2Q9Y333 95 aaKnown RBP4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 CACNA1HO95180 2353 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 TECTAO75443 2155 aa4.14□□□□□ -1.75
PDLIM5-211ENST00000508531 GBF1Q92538 1859 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SCN5AQ14524 2016 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM72A0PK05 275 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CLEC18AA5D8T8 446 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ASPDHA6ND91 283 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SEC14L6B5MCN3 397 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 UBFD1O14562 309 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ITGB1BP1O14713 200 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PGRMC2O15173 223 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 HSPA12AO43301 675 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF749O43361 778 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 OR2T1O43869 369 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 KLK8O60259 260 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 GALR3O60755 368 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SH3BGRLO75368 114 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PRKRAO75569 313 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CNMDO75829 334 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 GATBO75879 557 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 GAS8-AS1O95177 125 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 NSA2O95478 260 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 OTCP00480 354 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CFDP00746 253 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ALDOBP05062 364 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SERPIND1P05546 499 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 METTL15P1P0C7V9 234 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 LINC00032P0C843 101 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 COX5BP10606 129 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 IGFBP2P18065 325 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 RCC1P18754 421 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PSMB1P20618 241 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PRKACGP22612 351 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 HTR2CP28335 458 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 KDELR2P33947 212 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 AVPR1AP37288 418 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 RBM34P42696 430 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC1A2P43004 574 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 HTR5AP47898 357 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 KCNJ3P48549 501 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PPM1FP49593 454 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PDLIM4P50479 330 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SUOXP51687 545 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ART1P52961 327 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 DIO3P55073 304 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 VSX2P58304 361 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SELENOVP59797 346 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TPI1P60174 286 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 UFM1P61960 85 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 NUTF2P61970 127 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 RBBP4Q09028 425 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SNTB2Q13425 540 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 HTR4Q13639 388 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 GRB14Q14449 540 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SHBQ15464 509 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNHIT3Q15649 155 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC35D3Q5M8T2 416 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SPOUT1Q5T280 376 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 OTUD1Q5VV17 481 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 DCAF12L2Q5VW00 463 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TPGS2Q68CL5 300 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ADNP2Q6IQ32 1131 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC39A4Q6P5W5 647 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM199XQ6PEV8 388 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PAPD4Q6PIY7 484 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 GLDNQ6ZMI3 551 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CYHR1Q6ZMK1 362 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 NDUFAF7Q7L592 441 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ANKRD33Q7Z3H0 272 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM179BQ7Z7N9 219 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF329Q86UD4 541 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PARGQ86W56 976 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SERPINA12Q8IW75 414 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 COMMD1Q8N668 190 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 NKAIN3Q8N8D7 197 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 L3MBTL4Q8NA19 623 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 HSD17B11Q8NBQ5 300 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CLEC18CQ8NCF0 446 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM185AQ8NFB2 350 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 BPIFCQ8NFQ6 507 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 DBF4BQ8NFT6 615 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 OR2L8Q8NGY9 312 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 OR5R1Q8NH85 324 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 RXFP4Q8TDU9 374 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CCDC107Q8WV48 283 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 MAFIPQ8WZ33 124 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM143Q96AN5 459 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 C14orf144Q96I85 54 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 NECTIN4Q96NY8 510 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 HBEGFQ99075 208 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 DDOQ99489 341 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ATF6BQ99941 703 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 EGFL8Q99944 293 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CMSS1Q9BQ75 279 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms