RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PLD1Q13393 1074 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 EIF4EBP1Q13541 118 aaPredicted RBP2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 C16orf72Q14CZ0 275 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF77Q15935 545 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 SYPL1Q16563 259 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 C2orf76Q3KRA6 126 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 OR8G2PQ6IF36 304 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 RABEPKQ7Z6M1 372 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 BATF2Q8N1L9 274 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 CCNYQ8ND76 341 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 OR52I1Q8NGK6 324 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF721Q8TF20 911 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 OR1E3Q8WZA6 343 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 CYP2S1Q96SQ9 504 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 SPZ1Q9BXG8 430 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 NFKBIZQ9BYH8 718 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 SLC25A51Q9H1U9 297 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 XPNPEP1Q9NQW7 623 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 UTP6Q9NYH9 597 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 P2RX2Q9UBL9 471 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 KCNN3Q9UGI6 736 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 DCDC2Q9UHG0 476 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 CUBNO60494 3623 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 ANK2Q01484 3957 aa2.96□□□□□ -1.93
TOPBP1-206ENST00000508524 VPS13CQ709C8 3753 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 MYOFQ9NZM1 2061 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 VPS37CA5D8V6 355 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 RNF222A6NCQ9 220 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 A6NDX4 124 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 A8MUA0 341 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 WASH3PC4AMC7 463 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 OLFM2O95897 454 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 THRBP10828 461 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 H2AFXP16104 143 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 PAX5Q02548 391 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 UNC119Q13432 240 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 SNX1Q13596 522 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 TPGS2Q68CL5 300 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 CENPPQ6IPU0 288 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 NEK5Q6P3R8 708 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 NIPA1Q7RTP0 329 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 FAM71E2Q8N5Q1 922 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 Q8N9W7 124 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 ZSCAN4Q8NAM6 433 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 MDS2Q8NDY4 140 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 CNNM3Q8NE01 707 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 IL1F10Q8WWZ1 152 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 UPRTQ96BW1 309 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 ZNF578Q96N58 590 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 MCHR1Q99705 422 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 POLR3FQ9H1D9 316 aaPredicted RBP2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 VCXQ9H320 206 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 PPDPFQ9H3Y8 114 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 DHX33Q9H6R0 707 aaKnown RBP2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 NRBP2Q9NSY0 501 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 C1orf123Q9NWV4 160 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 RTTNQ86VV8 2226 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 TRIP11Q15643 1979 aa2.96□□□□□ -1.94
TOPBP1-206ENST00000508524 SHANK1Q9Y566 2161 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 DENND4CQ5VZ89 1909 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 ESPL1Q14674 2120 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 A0A1B0GTQ1 180 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 A0A1W2PQ67 120 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 K7EM74 188 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 MSH4O15457 936 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 ICOSLGO75144 302 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 ERLIN2O94905 339 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 LDOC1O95751 146 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 KRT7P08729 469 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 CCNCP24863 283 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 PDGFRLQ15198 375 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 ATF7IP2Q5U623 682 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 SDHAF4Q5VUM1 108 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 UNQ9370/PRO34162Q6UXP9 181 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 RNF165Q6ZSG1 346 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 TAF8Q7Z7C8 310 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 EID2Q8N6I1 236 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 OR10T2Q8NGX3 314 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 DQX1Q8TE96 717 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 PDCD6IPQ8WUM4 868 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 FEM1AQ9BSK4 669 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 SRXN1Q9BYN0 137 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 TM9SF3Q9HD45 589 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 NECAP2Q9NVZ3 263 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 PLA2G4CQ9UP65 541 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 STRAPQ9Y3F4 350 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 PKDREJQ9NTG1 2253 aa2.95□□□□□ -1.94
TOPBP1-206ENST00000508524 GSTT2P0CG29 244 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 GSTT2BP0CG30 244 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 CALM1P0DP23 149 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 CALM2P0DP24 149 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 CALM3P0DP25 149 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 GLRA2P23416 452 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 LHX2P50458 406 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 TPMTP51580 245 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 RPL10AP62906 217 aaKnown RBP2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 WDR74Q6RFH5 385 aaPredicted RBP2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 ARSKQ6UWY0 536 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 ZFP2Q6ZN57 461 aa2.94□□□□□ -1.94
TOPBP1-206ENST00000508524 ZNF429Q86V71 674 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms