RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CCSO14618 274 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 ST8SIA3O43173 380 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 TK1P04183 234 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 F3P13726 295 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 RFC3P40938 356 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 SLC6A11P48066 632 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 RAB11AP62491 216 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 MRPL49Q13405 166 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 IHHQ14623 411 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 SLC22A6Q4U2R8 563 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 EXOSC6Q5RKV6 272 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 FIBINQ8TAL6 211 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 LKAAEAR1Q8TD35 194 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 IRF7Q92985 503 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 ISG20Q96AZ6 181 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 ANKRD9Q96BM1 317 aaPredicted RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 WDR89Q96FK6 387 aaPredicted RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 TEAD3Q99594 435 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 USB1Q9BQ65 265 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 CMSS1Q9BQ75 279 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 EDEM2Q9BV94 578 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 CHST8Q9H2A9 424 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 CXorf36Q9H7Y0 433 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 FBRSQ9HAH7 460 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 MYO5AQ9Y4I1 1855 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-224ENST00000508474 NPIPB15A6NHN6 443 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PLSCR1O15162 318 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 TCAPO15273 167 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 TAPBPO15533 448 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 NME2P1O60361 137 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 GLCEO94923 617 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 APOA2P02652 100 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CTSLP07711 333 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 HOXA11P31270 313 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 FAM74A1Q5RGS3 127 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PHYHD1Q5SRE7 291 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 FAM162BQ5T6X4 162 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ANKRD34AQ69YU3 496 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PAQR6Q6TCH4 344 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 TMEM207Q6UWW9 146 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 OR4N5Q8IXE1 308 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 OR10D4PQ8NGN7 298 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 SFT2D1Q8WV19 159 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 BRI3BPQ8WY22 251 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PDXPQ96GD0 296 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CABLES2Q9BTV7 478 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CPEB1Q9BZB8 566 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CRLF2Q9HC73 371 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ZNF160Q9HCG1 818 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 KCNIP2Q9NS61 270 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 RYDENQ9NUL5 291 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ZNF230Q9UIE0 474 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 GDF2Q9UK05 429 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PPT2Q9UMR5 302 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 B3GALT5Q9Y2C3 310 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 LAMB4A4D0S4 1761 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 IFITM5A6NNB3 132 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 BCKDHBP21953 392 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 HIST1H1TP22492 207 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 GABRR1P24046 479 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 TRHRP34981 398 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 SOX18P35713 384 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 DVL1P1P54792 670 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PCBP4P57723 403 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ERVK-16P61578 105 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ACVR1Q04771 509 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ENDOGQ14249 297 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 VAMP3Q15836 100 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CST9LP1Q5W188 147 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 FAM71E1Q6IPT2 247 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PET117Q6UWS5 81 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 SLC16A13Q7RTY0 426 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 OR2W3Q7Z3T1 314 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ZNF480Q8WV37 535 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PTP4A1Q93096 173 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 PIGQQ9BRB3 760 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 C16orf70Q9BSU1 422 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 METTL9Q9H1A3 318 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 OR10A5Q9H207 317 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 OR10A2Q9H208 303 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 FBXL12Q9NXK8 326 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 AK3Q9UIJ7 227 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 TP53TG5Q9Y2B4 290 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 RGPD1P0DJD0 1748 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 E5RGE8 158 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 M0R143 59 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 SLC16A7O60669 478 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 NDUFB6O95139 128 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 C1orf105O95561 183 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CBX7O95931 251 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 SBK3P0C264 359 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CSF2RAP15509 400 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 ADRA2CP18825 462 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 RPL12P30050 165 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 FCGR2CP31995 323 aa6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 CTSOP43234 321 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-224ENST00000508474 RAB30Q15771 203 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms