RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 CNOT2Q9NZN8 540 aaKnown RBP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 FKBP7Q9Y680 259 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 DNAJC13O75165 2243 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 PRSS37A4D1T9 235 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 CLCA1A8K7I4 914 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 MRPL33O75394 65 aaKnown RBP12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 IFNGR1P15260 489 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 PAX7P23759 505 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 SHC1P29353 583 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 TIMP3P35625 211 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 CHN2P52757 468 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 ERVK-25P63136 954 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 GLO1Q04760 184 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 GXYLT1Q4G148 440 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 ACSM5Q6NUN0 579 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 MTFR2Q6P444 385 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 CXXC5Q7LFL8 322 aaKnown RBP12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 TCEANCQ8N8B7 351 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 OR52E2Q8NGJ4 325 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 ZNF519Q8TB69 540 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 ASB10Q8WXI3 467 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 WACQ9BTA9 647 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 VSX1Q9NZR4 365 aaPredicted RBP12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 KLHL13Q9P2N7 655 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 NOSIPQ9Y314 301 aaKnown RBP12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 KIAA1549Q9HCM3 1950 aa12.86□□□□□ -0.35
HMGCLL1-208ENST00000508459 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ARHGEF9O43307 516 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TRAF3IP2O43734 574 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMCC2O75069 709 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 IL2RAP01589 272 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 OPN1LWP04000 364 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TPOP07202 933 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 PIPP12273 146 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 HIST1H1CP16403 213 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 HTR1FP30939 366 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ZNF84P51523 738 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 P2RY4P51582 365 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TDGF1P3P51864 188 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 PER3P56645 1201 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 EFNB1P98172 346 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 RAB40BQ12829 278 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 KCTD21Q4G0X4 260 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ACSF3Q4G176 576 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 C6orf141Q5SZD1 244 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 C1orf185Q5T7R7 199 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 Q6ZPB1 254 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ENTHD1Q8IYW4 607 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 OR6N1Q8NGY5 312 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 OR4Q3Q8NH05 313 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 CPT1CQ8TCG5 803 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 HAVCR2Q8TDQ0 301 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 CNTNAP3BQ96NU0 1288 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TSPAN32Q96QS1 320 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 SRXN1Q9BYN0 137 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 CNTNAP3Q9BZ76 1288 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 LINC00470Q9BZP3 86 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 INPP5EQ9NRR6 644 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 CHCHD3Q9NX63 227 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 HAO2Q9NYQ3 351 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 B3GAT1Q9P2W7 334 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 KCNG2Q9UJ96 466 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ZNF346Q9UL40 294 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 FLVCR1Q9Y5Y0 555 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMEM14AQ9Y6G1 99 aa12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 TPRP12270 2363 aaKnown RBP12.85□□□□□ -0.35
HMGCLL1-208ENST00000508459 ZNF407Q9C0G0 2248 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 ZNF716A6NP11 495 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 KDM4EB2RXH2 506 aaPredicted RBP12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 KRT33AO76009 404 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 EPHA2P29317 976 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 MTNR1AP48039 350 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 CDH11P55287 796 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 SH3BGRP55822 239 aaPredicted RBP12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 BIDP55957 195 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 CLDN17P56750 224 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 ACTC1P68032 377 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 ACTA1P68133 377 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 CD47Q08722 323 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 CDK5R2Q13319 367 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 NRN1LQ496H8 165 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 SLC35F1Q5T1Q4 408 aa12.84□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms