RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 LRRK2Q5S007 2527 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 SPTBN1Q01082 2364 aaKnown RBP9.08□□□□□ -0.96
HTT-204ENST00000508321 RELNP78509 3460 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ZNF726A6NNF4 738 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 XKRYO14609 159 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ARPC3O15145 178 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
HTT-204ENST00000508321 TXNDC12O95881 172 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 F13BP05160 661 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 OSMP13725 252 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ANPEPP15144 967 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 IFNGR1P15260 489 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 IGFBP5P24593 272 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ALDH3A2P51648 485 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 SH3BGRP55822 239 aaPredicted RBP9.08□□□□□ -0.96
HTT-204ENST00000508321 RPL27P61353 136 aaKnown RBP9.08□□□□□ -0.96
HTT-204ENST00000508321 ESRRGP62508 458 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 SORDQ00796 357 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ITGADQ13349 1161 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 RIPK1Q13546 671 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 P2RY6Q15077 328 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ACKR1Q16570 336 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 FBXW9Q5XUX1 488 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 KDM4DQ6B0I6 523 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 NIPAL3Q6P499 406 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 KLHL17Q6TDP4 642 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 NHLRC1Q6VVB1 395 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 FAM122BQ7Z309 247 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 BTLAQ7Z6A9 289 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 CCDC71Q8IV32 467 aaPredicted RBP9.08□□□□□ -0.96
HTT-204ENST00000508321 HS3ST5Q8IZT8 346 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 TMEM123Q8N131 208 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 NOXO1Q8NFA2 376 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 OR2T33Q8NG76 320 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 MOSPD2Q8NHP6 518 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ASB10Q8WXI3 467 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ZNF566Q969W8 418 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 GTPBP3Q969Y2 492 aaKnown RBP9.08□□□□□ -0.96
HTT-204ENST00000508321 EME1Q96AY2 570 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 ZNF570Q96NI8 536 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 RDH12Q96NR8 316 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 OR2M2Q96R28 347 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 SNX18Q96RF0 628 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 TNFRSF13CQ96RJ3 184 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 GPA33Q99795 319 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 NIPSNAP1Q9BPW8 284 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 KATNB1Q9BVA0 655 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 OR10A4Q9H209 315 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 VCXQ9H320 206 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 C12orf49Q9H741 205 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 KCNJ16Q9NPI9 418 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 KRT84Q9NSB2 600 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 USE1Q9NZ43 259 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 GRHPRQ9UBQ7 328 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 KLF2Q9Y5W3 355 aaPredicted RBP9.08□□□□□ -0.96
HTT-204ENST00000508321 FLNCQ14315 2725 aa9.08□□□□□ -0.96
HTT-204ENST00000508321 FREM1Q5H8C1 2179 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 SAC3D1A6NKF1 404 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 FAM90A27PA6NNH2 459 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 A8MXE2 369 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 ZNF587BE7ETH6 402 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 H3BN98 237 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 SERPINI2O75830 405 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 BAG2O95816 211 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 HLA-DOBP13765 273 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 POU2F1P14859 743 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 ZNF26P17031 533 aaPredicted RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 COX5AP20674 150 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 CSNK1A1P48729 337 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 RAD23AP54725 363 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 BIDP55957 195 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 FXYD6P3P58550 94 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 CTXN1P60606 82 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 KRR1Q13601 381 aaKnown RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 DAG1Q14118 895 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 SLC36A3Q495N2 470 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 ARMC4Q5T2S8 1044 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 SLC27A4Q6P1M0 643 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 NUFIP2Q7Z417 695 aaKnown RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 KIF18BQ86Y91 864 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 KDM8Q8N371 416 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 GPR137CQ8N3F9 429 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 PACRGLQ8N7B6 248 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 C1orf162Q8NEQ5 155 aaPredicted RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 ZNF519Q8TB69 540 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 MAGEE2Q8TD90 523 aaPredicted RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 RNASE6Q93091 150 aaKnown RBP9.07□□□□□ -0.96
HTT-204ENST00000508321 TSPAN32Q96QS1 320 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 CIB1Q99828 191 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 IFT27Q9BW83 186 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 GABARAPL3Q9BY60 117 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 SMURF2Q9HAU4 748 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 RNPEPL1Q9HAU8 725 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 SLC24A3Q9HC58 644 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 ASB6Q9NWX5 421 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 MED29Q9NX70 200 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 UPB1Q9UBR1 384 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 DOPEY2Q9Y3R5 2298 aa9.07□□□□□ -0.96
HTT-204ENST00000508321 HCFC1P51610 2035 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms