RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 MT-ND1P03886 318 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 HIST1H2ABP04908 130 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 HOXB1P14653 301 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 NQO1P15559 274 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ITGA2P17301 1181 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 HOXB6P17509 224 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 MPGP29372 298 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 PUDPQ08623 228 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ZP4Q12836 540 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 PMS2P3Q13401 168 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 STK11Q15831 433 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ZNF74Q16587 644 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 GLYATQ6IB77 296 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 CREB3L2Q70SY1 520 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 FKBP9P1Q75LS8 142 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 HIST3H2AQ7L7L0 130 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 PXKQ7Z7A4 578 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 UEVLDQ8IX04 471 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 UBE2J2Q8N2K1 259 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 FITM2Q8N6M3 262 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 C10orf53Q8N6V4 93 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ZNF525Q8N782 197 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 PIK3C3Q8NEB9 887 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 OR4D11Q8NGI4 311 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ZNF417Q8TAU3 575 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 LIPHQ8WWY8 451 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 HTRA1Q92743 480 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 HIST1H2ACQ93077 130 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 TPD52L3Q96J77 140 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ADAD1Q96M93 576 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ZNF587Q96SQ5 575 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 NDEL1Q9GZM8 345 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 C1orf21Q9H246 121 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 NANSQ9NR45 359 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 ARL8BQ9NVJ2 186 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 RIMS3Q9UJD0 308 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 SLC7A7Q9UM01 511 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 PRPF19Q9UMS4 504 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 FAM32AQ9Y421 112 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 SNX13Q9Y5W8 968 aa8.06□□□□□ -1.12
UBE2D3-223ENST00000508249 CIB4A0PJX0 185 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 CENPBD1B2RD01 187 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 SHISA9B4DS77 424 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 RPL36A-HNRNPH2H7BZ11 118 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 PDLIM1O00151 329 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 CLOCKO15516 846 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 RAMP1O60894 148 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 KRT33AO76009 404 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 LYPD3O95274 346 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 ZNF682O95780 498 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 SERPINA1P01009 418 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 NR2C1P13056 603 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 PTNP21246 168 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 SMIM11AP58511 58 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 TRAM2Q15035 370 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 TSC22D1Q15714 1073 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 KLHL24Q6TFL4 600 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 NANOGNBQ7Z5D8 188 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 RBM45Q8IUH3 476 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 EPHX4Q8IUS5 362 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 CCDC36Q8IYA8 594 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 DEFB107AQ8IZN7 70 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 ZNF433Q8N7K0 673 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 ZIC4Q8N9L1 334 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 SEMA6DQ8NFY4 1073 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 BCAS4Q8TDM0 211 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 C10orf105Q8TEF2 133 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 TMEM239Q8WW34 195 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 S100PBPQ96BU1 408 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 RADILQ96JH8 1075 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 HSH2DQ96JZ2 352 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 LRR1Q96L50 414 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 NSMCE2Q96MF7 247 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 MUS81Q96NY9 551 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 WFDC6Q9BQY6 131 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 RHNO1Q9BSD3 238 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 FNDC11Q9BVV2 318 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 PRR14Q9BWN1 585 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 CHODLQ9H9P2 273 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 BARX1Q9HBU1 254 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 KRCC1Q9NPI7 259 aaPredicted RBP8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 B3GAT2Q9NPZ5 323 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 DCAF13Q9NV06 445 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 B3GAT1Q9P2W7 334 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 CD300AQ9UGN4 299 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 PRSS50Q9UI38 385 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 USP22Q9UPT9 525 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 AMDHD2Q9Y303 409 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 MED31Q9Y3C7 131 aa8.05□□□□□ -1.12
UBE2D3-223ENST00000508249 NBEAL2Q6ZNJ1 2754 aa8.04□□□□□ -1.12
UBE2D3-223ENST00000508249 DPRXA6NFQ7 191 aa8.04□□□□□ -1.12
UBE2D3-223ENST00000508249 NPIPB13A6NJU9 1138 aa8.04□□□□□ -1.12
UBE2D3-223ENST00000508249 OR5H1A6NKK0 313 aa8.04□□□□□ -1.12
UBE2D3-223ENST00000508249 B2RBV5 119 aa8.04□□□□□ -1.12
UBE2D3-223ENST00000508249 VWC2LB2RUY7 222 aa8.04□□□□□ -1.12
UBE2D3-223ENST00000508249 NPIPB4C9JG80 1138 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms