RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 EGFL7Q9UHF1 273 aa7.2□□□□□ -1.26
SCN1A-207ENST00000507401 RPH3AQ9Y2J0 694 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF175Q9Y473 711 aa7.2□□□□□ -1.26
SCN1A-207ENST00000507401 GPR45Q9Y5Y3 372 aa7.2□□□□□ -1.26
SCN1A-207ENST00000507401 KIAA1549Q9HCM3 1950 aa7.2□□□□□ -1.26
SCN1A-207ENST00000507401 MAP1AP78559 2803 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 CELSR1Q9NYQ6 3014 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 A0A1W2PNV4 684 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SLC22A20A6NK97 555 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 DUXAA6NLW8 204 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SCDO00767 359 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 GSTA4O15217 222 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 MPZL2O60487 215 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 TNFSF13O75888 250 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 CLIC3O95833 236 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 LGI1O95970 557 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ACP2P11117 423 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 HPGDP15428 266 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 CD1EP15812 388 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF17P17021 662 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 IL11P20809 199 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 IGFBP5P24593 272 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 EIF1P41567 113 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 MAGEA2P43356 314 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 RFX3P48380 749 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 POLR2JP52435 117 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 BLVRAP53004 296 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SUCLG1P53597 346 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 VBP1P61758 197 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 B2MP61769 119 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 POU6F2P78424 691 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 IL5RAQ01344 420 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 RUNX1T1Q06455 604 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 KLHL26Q53HC5 615 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 RAET1LQ5VY80 246 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 CDC73Q6P1J9 531 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 METAP1DQ6UB28 335 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 Q6ZS46 218 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SLC46A3Q7Z3Q1 461 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 P4HA3Q7Z4N8 544 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 GTPBP8Q8N3Z3 284 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 COX18Q8N8Q8 333 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF540Q8NDQ6 660 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 OR8J2Q8NGG1 315 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SFXN5Q8TD22 340 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ADAMTS15Q8TE58 950 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ZBTB8AQ96BR9 441 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 STARD4Q96DR4 205 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ZBTB18Q99592 522 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 FOXC2Q99958 501 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 UQCC2Q9BRT2 126 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 DUSP26Q9BV47 211 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 RBM24Q9BX46 236 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 C6orf62Q9GZU0 229 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 PPA2Q9H2U2 334 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 CLEC4MQ9H2X3 399 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 RANBP3Q9H6Z4 567 aaPredicted RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 RNF122Q9H9V4 155 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SLC52A3Q9NQ40 469 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 GPATCH2Q9NW75 528 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 ELOVL5Q9NYP7 299 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 GLTPQ9NZD2 209 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 NDRG3Q9UGV2 375 aa7.19□□□□□ -1.26
SCN1A-207ENST00000507401 NDRG4Q9ULP0 352 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 SAMD4AQ9UPU9 718 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 TEP1Q99973 2627 aaKnown RBP7.19□□□□□ -1.26
SCN1A-207ENST00000507401 NUP214P35658 2090 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SH3D21A4FU49 640 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 C17orf51A8MQB3 221 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 EEF1E1-BLOC1S5C9J1V9 151 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 PTGES3LE9PB15 166 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 ADAMDEC1O15204 470 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 EEF1E1O43324 174 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 IFNA7P01567 189 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 HMGN1P05114 100 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 GUSBP08236 651 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 ALDOCP09972 364 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CD8BP10966 210 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 G6PDP11413 515 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 FCGR2AP12318 317 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 FOSL1P15407 271 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 IL7RP16871 459 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CFL1P23528 166 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 TGFBR2P37173 567 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 KIR2DL2P43627 348 aaPredicted RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 EIF1AXP47813 144 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 ATP12AP54707 1039 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 NCS1P62166 190 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SCRN3Q0VDG4 424 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 MAB21L1Q13394 359 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 TP53BP2Q13625 1128 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SNTB1Q13884 538 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 LASP1Q14847 261 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 QPRTQ15274 297 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SGCBQ16585 318 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 CTU2Q2VPK5 515 aaKnown RBP7.18□□□□□ -1.26
SCN1A-207ENST00000507401 SLC35F1Q5T1Q4 408 aa7.18□□□□□ -1.26
SCN1A-207ENST00000507401 ZBTB37Q5TC79 503 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms