RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 GPA33Q99795 319 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 GPR35Q9HC97 309 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 INIPQ9NRY2 104 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 RASSF1Q9NS23 344 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 ZNF226Q9NYT6 803 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 TMEM5Q9Y2B1 443 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 SPG11Q96JI7 2443 aa15.97■□□□□ 0.15
NPHP4-210ENST00000506941 ROS1P08922 2347 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 CIB4A0PJX0 185 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 OR5H1A6NKK0 313 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 CASKO14936 926 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 KLF4O43474 513 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 HRGP04196 525 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 LOXP28300 417 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-210ENST00000506941 ROR2Q01974 943 aaKnown RBP15.96■□□□□ 0.15
NPHP4-210ENST00000506941 ACKR1Q16570 336 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 ALG10Q5BKT4 473 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 ZER1Q7Z7L7 766 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 IGFN1Q86VF2 1251 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 TMEM200AQ86VY9 491 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 SPATA24Q86W54 205 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 CDK20Q8IZL9 346 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 GPR137CQ8N3F9 429 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 OR4C15Q8NGM1 316 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 OR6X1Q8NH79 312 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 ASB10Q8WXI3 467 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 HSD17B8Q92506 261 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 LRR1Q96L50 414 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 ADAD1Q96M93 576 aaKnown RBP15.96■□□□□ 0.15
NPHP4-210ENST00000506941 MUS81Q96NY9 551 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 AURKCQ9UQB9 309 aa15.96■□□□□ 0.15
NPHP4-210ENST00000506941 A0A1W2PPR1 153 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 A0A1W2PR80 420 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 A0A1W2PRG6 482 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 ZNF726A6NNF4 738 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 RPL36A-HNRNPH2H7BZ11 118 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 M0R3G1 203 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 PGA4P0DJD7 388 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 PGA3P0DJD8 388 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 CDH2P19022 906 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 HMGA2P52926 109 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 FXYD6P3P58550 94 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 RUNX1T1Q06455 604 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 PPP1R8Q12972 351 aaKnown RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 ZBED5Q49AG3 693 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 TIMM23BQ5SRD1 257 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 OR2T5Q6IEZ7 315 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 ALKBH2Q6NS38 261 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 ABHD12BQ7Z5M8 362 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 C1orf162Q8NEQ5 155 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 OR2T29Q8NH02 315 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 UTP4Q969X6 686 aaKnown RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 CHID1Q9BWS9 393 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 MMADHCQ9H3L0 296 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 NELFAQ9H3P2 528 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 CRLF2Q9HC73 371 aa15.95■□□□□ 0.14
NPHP4-210ENST00000506941 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.95■□□□□ 0.14
NPHP4-210ENST00000506941 NPIPB13A6NJU9 1138 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 NPIPB4C9JG80 1138 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 MCIDASD6RGH6 385 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 TNFRSF11BO00300 401 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 EBAG9O00559 213 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 PTP4A3O75365 173 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 KRT36O76013 467 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 BCL10O95999 233 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 IGHMP01871 453 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 CSNK1A1P48729 337 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 PPA1Q15181 289 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 CEACAM16Q2WEN9 425 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 ANKDD1AQ495B1 522 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 HIKESHIQ53FT3 197 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 ARMC4Q5T2S8 1044 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 OR7E24Q6IFN5 339 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 HMBOX1Q6NT76 420 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 P2RY8Q86VZ1 359 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 WDR31Q8NA23 367 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 OR1K1Q8NGR3 316 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 OR52N5Q8NH56 324 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 TMEM54Q969K7 222 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 SLCO4A1Q96BD0 722 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 PIK3IP1Q96FE7 263 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 SLC25A44Q96H78 314 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-210ENST00000506941 BOD1Q96IK1 185 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 RSRC1Q96IZ7 334 aaKnown RBP15.94■□□□□ 0.14
NPHP4-210ENST00000506941 LURAP1Q96LR2 239 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 HS3ST6Q96QI5 342 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 USB1Q9BQ65 265 aaKnown RBP15.94■□□□□ 0.14
NPHP4-210ENST00000506941 CLEC4MQ9H2X3 399 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-210ENST00000506941 TXNIPQ9H3M7 391 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 SLC17A5Q9NRA2 495 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 NPAP1Q9NZP6 1156 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 TMCC3Q9ULS5 477 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 SIGLEC7Q9Y286 467 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 SLC25A15Q9Y619 301 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 AKAP9Q99996 3911 aa15.94■□□□□ 0.14
NPHP4-210ENST00000506941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-210ENST00000506941 UNC119BA6NIH7 251 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 OR10H3O60404 316 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 GOSR1O95249 250 aa15.93■□□□□ 0.14
NPHP4-210ENST00000506941 DAP3P51398 398 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms