RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 T-ENOLP0DO92 83 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 IFNGR1P15260 489 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 FUT4P22083 530 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 BIDP55957 195 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 VLDLRP98155 873 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ROR2Q01974 943 aaKnown RBP11.5□□□□□ -0.57
TCOF1-209ENST00000506630 RPL18Q07020 188 aaKnown RBP11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ZP4Q12836 540 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 CAMK2DQ13557 499 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 MELKQ14680 651 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 KLHL24Q6TFL4 600 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 CYP2R1Q6VVX0 501 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF730Q6ZMV8 503 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF704Q6ZNC4 412 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-209ENST00000506630 SLC35D2Q76EJ3 337 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 SSX8Q7RTT4 187 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 NRMQ8IXM6 262 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ARHGAP24Q8N264 748 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-209ENST00000506630 C17orf78Q8N4C9 275 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ANKK1Q8NFD2 765 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 PYURFQ96I23 114 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 Q96MF0 132 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 MUS81Q96NY9 551 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 PIP5K1AQ99755 562 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
TCOF1-209ENST00000506630 TAS2R5Q9NYW4 299 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 NPAP1Q9NZP6 1156 aa11.5□□□□□ -0.57
TCOF1-209ENST00000506630 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 MCIDASD6RGH6 385 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 M0R3G1 203 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 CLOCKO15516 846 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 PRSS23O95084 383 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 PLAUP00749 431 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 F13BP05160 661 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 H1F0P07305 194 aaKnown RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 CD3EP07766 207 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 SAGP10523 405 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 RHCEP18577 417 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 ATP6V1B2P21281 511 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 AQP2P41181 271 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 BSPH1Q075Z2 132 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 HIKESHIQ53FT3 197 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 FGD3Q5JSP0 725 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 NCMAPQ5T1S8 102 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 PRSS57Q6UWY2 283 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 SEZ6L2Q6UXD5 910 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 TSEN54Q7Z6J9 526 aaKnown RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 MEX3DQ86XN8 651 aaKnown RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 TMEM123Q8N131 208 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 OR1K1Q8NGR3 316 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 OR6N1Q8NGY5 312 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 MCUR1Q96AQ8 359 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 BPIFA2Q96DR5 249 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 NMNAT1Q9HAN9 279 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 CRLF2Q9HC73 371 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 B3GAT2Q9NPZ5 323 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 SLC17A5Q9NRA2 495 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 NDUFAF4Q9P032 175 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 ACTR3BQ9P1U1 418 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 PRPF19Q9UMS4 504 aaKnown RBP11.49□□□□□ -0.57
TCOF1-209ENST00000506630 AMDHD2Q9Y303 409 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 RNF115Q9Y4L5 304 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 ARID1AO14497 2285 aa11.49□□□□□ -0.57
TCOF1-209ENST00000506630 A0A087WUU8 490 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 A0A1W2PRG6 482 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 WNT11O96014 354 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 SEMG1P04279 462 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 FABP3P05413 133 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 ITGA2P17301 1181 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 MAKP20794 623 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 CSNK1A1P48729 337 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 ZNF83P51522 516 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 SH3BGRP55822 239 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-209ENST00000506630 SPIBQ01892 262 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 TBRG1Q3YBR2 411 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 PHYHD1Q5SRE7 291 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 MBOAT2Q6ZWT7 520 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 RRM2BQ7LG56 351 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 YTHDF3Q7Z739 585 aaKnown RBP11.48□□□□□ -0.57
TCOF1-209ENST00000506630 WDFY1Q8IWB7 410 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 C20orf196Q8IYI0 205 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 CDK20Q8IZL9 346 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 LIPHQ8WWY8 451 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 CCDC124Q96CT7 223 aaKnown RBP11.48□□□□□ -0.57
TCOF1-209ENST00000506630 C7orf34Q96L11 122 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 ADAD1Q96M93 576 aaKnown RBP11.48□□□□□ -0.57
TCOF1-209ENST00000506630 C1QTNF6Q9BXI9 259 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 ULBP2Q9BZM5 246 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 C1orf21Q9H246 121 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 MUC13Q9H3R2 512 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 ANKRD19PQ9H560 264 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 INIPQ9NRY2 104 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 TAS2R1Q9NYW7 299 aa11.48□□□□□ -0.57
TCOF1-209ENST00000506630 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms