RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TRIM40Q6P9F5 258 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 LRRC31Q6UY01 552 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 TBC1D21Q8IYX1 336 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 Q8N976 141 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 EIF1ADQ8N9N8 165 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 OR8J1Q8NGP2 316 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 MED8Q96G25 268 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 OR8B4Q96RC9 309 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 TAAR1Q96RJ0 339 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 SORT1Q99523 831 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 ECSITQ9BQ95 431 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 GPR61Q9BZJ8 451 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 ANKRD19PQ9H560 264 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 AZI2Q9H6S1 392 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 MRPL47Q9HD33 250 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 EXD2Q9NVH0 621 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 PACSIN2Q9UNF0 486 aaPredicted RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 PIGLQ9Y2B2 252 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 N6AMT1Q9Y5N5 214 aa2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 F11RQ9Y624 299 aaKnown RBP2.44□□□□□ -2.02
TOPBP1-204ENST00000505804 NFASCO94856 1347 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 IGLV11-55A0A075B6I3 123 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 PLAC8L1A1L4L8 177 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 PRSS37A4D1T9 235 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 BTBD17A6NE02 478 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 ERVV-1B6SEH8 477 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 H3BNH8 94 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 DLGAP1O14490 977 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 B4GALT2O60909 372 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 SPAG7O75391 227 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 IGHV2-5P01817 119 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 GAPDHP04406 335 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 IGHV3-43DP0DP04 118 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 RORAP35398 523 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 SSR1P43307 286 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 GPR6P46095 362 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 PFN3P60673 137 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 DEFB116Q30KQ4 102 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 COA6Q5JTJ3 125 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 CENPPQ6IPU0 288 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 CASC1Q6TDU7 716 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 KDM7AQ6ZMT4 941 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 LINC00173Q6ZV60 143 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 ARL6IP6Q8N6S5 226 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 ACTRT1Q8TDG2 376 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 STARD8Q92502 1023 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 SGK3Q96BR1 496 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 AURKBQ96GD4 344 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 C12orf42Q96LP6 360 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 NPY6RQ99463 290 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 SLC39A3Q9BRY0 314 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 MFFQ9GZY8 342 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 LRRC40Q9H9A6 602 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 FN3KRPQ9HA64 309 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 UGT1A7Q9HAW7 530 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 UGT1A10Q9HAW8 530 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 UGT1A8Q9HAW9 530 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 SGK2Q9HBY8 427 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 CTPS2Q9NRF8 586 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 ATAD2BQ9ULI0 1458 aa2.43□□□□□ -2.02
TOPBP1-204ENST00000505804 CDHR2Q9BYE9 1310 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 TET2Q6N021 2002 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 CEMIPQ8WUJ3 1361 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 HAS3O00219 553 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 XKRYO14609 159 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 MGRN1O60291 552 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 MED6O75586 246 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 UPK3AO75631 287 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 FGF1P05230 155 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ETS2P15036 469 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF30P17039 623 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ATP5C1P36542 298 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 HSD17B2P37059 387 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 SUB1P53999 127 aaKnown RBP eCLIP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 RPS21P63220 83 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 HMGCS1Q01581 520 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 PPIL2Q13356 520 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF77Q15935 545 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 IMMTQ16891 758 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 LYPD2Q6UXB3 125 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 PUSL1Q8N0Z8 303 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF557Q8N988 423 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 OR1L6Q8NGR2 347 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 OR2G2Q8NGZ5 317 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ZFP90Q8TF47 636 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 SDR42E1Q8WUS8 393 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 GEMIN6Q8WXD5 167 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 PLEKHA8Q96JA3 519 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 HSFY1Q96LI6 401 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 RARRES2Q99969 163 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 TMEM59Q9BXS4 323 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 GABARAPL3Q9BY60 117 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 LHX9Q9NQ69 397 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 ZNF639Q9UID6 485 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 NPTNQ9Y639 398 aa2.42□□□□□ -2.02
TOPBP1-204ENST00000505804 PPIAL4EA0A075B759 164 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 A0A1B0GVI7 797 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 CLRN2A0PK11 232 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 OR52A4PA6NMU1 304 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms