RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CREB3L2Q70SY1 520 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 TUBA1AQ71U36 451 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 LINGO2Q7L985 606 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 MYPOPQ86VE0 399 aaPredicted RBP5.1□□□□□ -1.59
GYPB-204ENST00000504951 TMEM99Q8N816 258 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 OR4A15Q8NGL6 344 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 ZNF563Q8TA94 476 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 TCP10LQ8TDR4 215 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 RAB1CQ92928 201 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 PPP1R14AQ96A00 147 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 DDIT4LQ96D03 193 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 TIMD4Q96H15 378 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 PKNOX2Q96KN3 472 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 TEX37Q96LM6 180 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 PRPF18Q99633 342 aaKnown RBP5.1□□□□□ -1.59
GYPB-204ENST00000504951 NOX4Q9NPH5 578 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 MKS1Q9NXB0 559 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 MID2Q9UJV3 735 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 OSGIN1Q9UJX0 560 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 FBXL3Q9UKT7 428 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 RCE1Q9Y256 329 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 HIF3AQ9Y2N7 669 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 TMED7Q9Y3B3 224 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 WDR45Q9Y484 360 aa5.1□□□□□ -1.59
GYPB-204ENST00000504951 AGAP5A6NIR3 686 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 LIPT2A6NK58 231 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 A8MXK9 166 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SRRM5B3KS81 715 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 HMGN4O00479 90 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 NR5A2O00482 541 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 RNASET2O00584 256 aaKnown RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 PIN1P1O15428 100 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ERLIN1O75477 346 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 PLATP00750 562 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 GPIP06744 558 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 BPGMP07738 259 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 CHRM4P08173 479 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ADH4P08319 380 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 CELA3BP08861 270 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ZNF14P17017 642 aaPredicted RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 UQCRC2P22695 453 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 CDKN2CP42773 168 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ETV4P43268 484 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 POLR2HP52434 150 aaKnown RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 SEC24CP53992 1094 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 LOXL3P58215 753 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SLC3A1Q07837 685 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 BNIP2Q12982 314 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SNTB2Q13425 540 aaKnown RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 CEACAM7Q14002 265 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 CASP8Q14790 479 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 GPAT3Q53EU6 434 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SPANXN4Q5MJ08 99 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 COX20Q5RI15 118 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 OTUD3Q5T2D3 398 aaPredicted RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 RNF130Q86XS8 419 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 EPHX4Q8IUS5 362 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ARFGAP2Q8N6H7 521 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 KIR3DL3Q8N743 410 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ZNF781Q8N8C0 355 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 OR8J2Q8NGG1 315 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 C22orf15Q8WYQ4 148 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 UBE2FQ969M7 185 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 TRIM44Q96DX7 344 aaPredicted RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 LRR1Q96L50 414 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 C1QTNF5Q9BXJ0 243 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SLC38A1Q9H2H9 487 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 TPK1Q9H3S4 243 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SLC6A13Q9NSD5 602 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 EXD2Q9NVH0 621 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 RLIMQ9NVW2 624 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 ASIC5Q9NY37 505 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 SLCO1C1Q9NYB5 712 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 IL20RAQ9UHF4 553 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 LEF1Q9UJU2 399 aaPredicted RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 PURGQ9UJV8 347 aaKnown RBP5.09□□□□□ -1.59
GYPB-204ENST00000504951 RASD1Q9Y272 281 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 WIPI2Q9Y4P8 454 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 INSIG2Q9Y5U4 225 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 AUP1Q9Y679 476 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 POMT1Q9Y6A1 747 aa5.09□□□□□ -1.59
GYPB-204ENST00000504951 A0A096LPE4 126 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 IGHV1-69-2A0A0G2JMI3 117 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 PRSS51A0A1B0GVH4 220 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 A0A1W2PPZ6 126 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 WDR91A4D1P6 747 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 ZNF503-AS2A6NEH8 195 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 ZNF99A8MXY4 864 aaPredicted RBP5.08□□□□□ -1.6
GYPB-204ENST00000504951 CLDN25C9JDP6 229 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 TYROBPO43914 113 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 NPIPB7O75200 414 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 UPK3AO75631 287 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 KRT33AO76009 404 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 FSTL3O95633 263 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 AGR2O95994 175 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 IGHMP01871 453 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 ALDOCP09972 364 aaKnown RBP5.08□□□□□ -1.6
GYPB-204ENST00000504951 GKN3PP0CG01 181 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 PRG2P13727 222 aa5.08□□□□□ -1.6
GYPB-204ENST00000504951 RPS4Y1P22090 263 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms