RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 OR10G3Q8NGC4 313 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 BRIX1Q8TDN6 353 aaKnown RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 LHX9Q9NQ69 397 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 SURF4O15260 269 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 CRTAPO75718 401 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 GPR50Q13585 617 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 FGFBP1Q14512 234 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 GDPD1Q8N9F7 314 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 OR5D18Q8NGL1 313 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 OR4Q3Q8NH05 313 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 SYNPRQ8TBG9 265 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 PLCXD1Q9NUJ7 323 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 C4orf51C9J302 202 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 MTRF1O75570 445 aaKnown RBP12.84□□□□□ -0.35
TCOF1-207ENST00000504761 MT-ATP6P00846 226 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 FOXF1Q12946 379 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 LRRC37A5PQ49AS3 106 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 C5orf46Q6UWT4 87 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 SLC25A45Q8N413 288 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 GNRHR2Q96P88 292 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 POU2F3Q9UKI9 436 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 PATJQ8NI35 1801 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 CHD5Q8TDI0 1954 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 FXYD6-FXYD2A0A087WZ82 144 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 MEGF11A6BM72 1044 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 HTR3BO95264 441 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 ABOP16442 354 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 MSX1P28360 303 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 APOBEC1P41238 236 aaKnown RBP12.84□□□□□ -0.35
TCOF1-207ENST00000504761 NKX2-5P52952 324 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-207ENST00000504761 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 CPNE2Q96FN4 548 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-207ENST00000504761 FCRL1Q96LA6 429 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 CCDC32Q9BV29 185 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 FXYD6Q9H0Q3 95 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 METTL8Q9H825 291 aaKnown RBP12.84□□□□□ -0.35
TCOF1-207ENST00000504761 CDC42EP2O14613 210 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 LYRM1O43325 122 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 STOMP27105 288 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 PTH2RP49190 550 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 TGM4P49221 684 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 HSF1Q00613 529 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 UBE2UQ5VVX9 321 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF611Q8N823 705 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-207ENST00000504761 C10orf90Q96M02 699 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF442Q9H7R0 627 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 EMC7Q9NPA0 242 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 HSPB11Q9Y547 144 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 CENPVL1A0A0U1RR11 272 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 P2RY10O00398 339 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 MGAMO43451 1857 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF117Q03924 483 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 FAM205BPQ63HN1 556 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 DTX4Q9Y2E6 619 aa12.84□□□□□ -0.35
TCOF1-207ENST00000504761 SIP14410 1827 aa12.83□□□□□ -0.35
TCOF1-207ENST00000504761 OR6C76A6NM76 312 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 GPRIN2O60269 458 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ERGP11308 486 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ARSBP15848 533 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ENPP1P22413 925 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 CFL1P23528 166 aaKnown RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 SDHAP31040 664 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 PRSS3P35030 304 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 GZMMP51124 257 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 RSU1Q15404 277 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 PYHIN1Q6K0P9 492 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 OVCH1Q7RTY7 1134 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 OR4D9Q8NGE8 314 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 OR52N1Q8NH53 320 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 C3orf49Q96BT1 292 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ORAI1Q96D31 301 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 DNAJB12Q9NXW2 375 aaKnown RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 A0A0B4J2E0 115 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 A0A1B0GX12 115 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 HTR5AP47898 357 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 RRADP55042 308 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 MAB21L1Q13394 359 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 RHBDD2Q6NTF9 364 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 DEFB124Q8NES8 71 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 SPACA9Q96E40 222 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 THAP7Q9BT49 309 aaPredicted RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
TCOF1-207ENST00000504761 TMEM74BQ9NUR3 256 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 FBXL4Q9UKA2 621 aa12.83□□□□□ -0.36
TCOF1-207ENST00000504761 NOSIPQ9Y314 301 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms