RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 LYG2Q86SG7 212 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 ARRDC1Q8N5I2 433 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 PATZ1Q9HBE1 687 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 PURGQ9UJV8 347 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 UBQLN1Q9UMX0 589 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 TFR2Q9UP52 801 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 ALG5Q9Y673 324 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 PTPRCP08575 1304 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 KCNK1O00180 336 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 ARPC1BO15143 372 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 LAMTOR5O43504 91 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 UGT1A9O60656 530 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 RNASEH1O60930 286 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 MPDU1O75352 247 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 UGT2B17O75795 530 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 CATP04040 527 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 IMPDH1P20839 514 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 XCR1P46094 333 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 CX3CR1P49238 355 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 UGT2B15P54855 530 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 MLLT10P55197 1068 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 RAB4BP61018 213 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 OSTNP61366 133 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 KLC1Q07866 573 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 SLC35D3Q5M8T2 416 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 DCAF10Q5QP82 559 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 TYW3Q6IPR3 259 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 CWC27Q6UX04 472 aaKnown RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 CCNI2Q6ZMN8 369 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-204ENST00000504430 SLC47A2Q86VL8 602 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 GLCCI1Q86VQ1 547 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 TRAPPC5Q8IUR0 188 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 SPATA22Q8NHS9 363 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 MS4A14Q96JA4 679 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 LGMNQ99538 433 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 ASB4Q9Y574 426 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 GMPPBQ9Y5P6 360 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 TAF1P21675 1872 aa4.52□□□□□ -1.69
NIPBL-204ENST00000504430 PNPLA6Q8IY17 1366 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 BLOC1S5-TXNDC5H3BN57 136 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 PSMD12O00232 456 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 HSD17B6O14756 317 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF749O43361 778 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 WDR1O75083 606 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 HPP00738 406 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 PCCAP05165 728 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 DCNP07585 359 aaKnown RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 CTSLP07711 333 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ACSM4P0C7M7 580 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 AOC1P19801 751 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 IFNA8P32881 189 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 GLUD2P49448 558 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 FLI1Q01543 452 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ACVR1Q04771 509 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TRAF3Q13114 568 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 IRF4Q15306 451 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 C3AR1Q16581 482 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 HES5Q5TA89 166 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 Q6ZNX1 250 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 FAM19A1Q7Z5A9 133 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ANKRD37Q7Z713 158 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF444Q8N0Y2 327 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 JAGN1Q8N5M9 183 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 LFNGQ8NES3 379 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 PIGXQ8TBF5 258 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 SETD7Q8WTS6 366 aaKnown RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TMEM27Q9HBJ8 222 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 DKK2Q9UBU2 259 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ST6GALNAC2Q9UJ37 374 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF225Q9UK10 706 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 FARSAQ9Y285 508 aaKnown RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ZNF729A6NN14 1252 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 F5H6K3 240 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 RGS14O43566 566 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 WNT11O96014 354 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 H2AFB1P0C5Y9 115 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 IDH3GP51553 393 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TRAF2Q12933 501 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 SLC1A5Q15758 541 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 MS4A18Q3C1V0 323 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 SLC36A2Q495M3 483 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 NIPAL1Q6NVV3 410 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 PIWIL4Q7Z3Z4 852 aaKnown RBP4.51□□□□□ -1.69
NIPBL-204ENST00000504430 HSD11B1LQ7Z5J1 315 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 STK40Q8N2I9 435 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 DNAJC22Q8N4W6 341 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 KIR3DL3Q8N743 410 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 TCEANCQ8N8B7 351 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 OR2T33Q8NG76 320 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 OR6N2Q8NGY6 317 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 APH1BQ8WW43 257 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 RASL10AQ92737 203 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 S100PBPQ96BU1 408 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 NUS1Q96E22 293 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 DEFB129Q9H1M3 183 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 ADGRL4Q9HBW9 690 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 GLYATL1P3A0A0U1RQE8 302 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 MYMKA6NI61 221 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 M0QZ92 97 aa4.51□□□□□ -1.69
NIPBL-204ENST00000504430 CLIC3O95833 236 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms